Rhizobium phaseoli: AMC79_CH00060
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Entry
AMC79_CH00060 CDS
T04590
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
rpha
Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AMC79_CH00060 (hrpB)
Enzymes [BR:
rpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AMC79_CH00060 (hrpB)
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_19
ResIII
AAA_30
Flavi_DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANL95922
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Position
complement(60133..62598)
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AA seq
821 aa
AA seq
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MTISPSLPELPVSHVLPAIGVALAEHKRAVLSAPPGAGKTTLVPLYLLEQAWRGDGRIIL
LEPRRLAARTAASRMASLIGQQVGGTVGYRMRLDNRISAATRIEVVTEGVFARMVLDDPE
LSGVSTVIFDEFHERSLDADFGLALALDVQSALREDLRLLVMSATLDIERVAALLEDPPV
IESLGRSFPIDIRYQDRPGGERIEDAVTRAIVEAHASETGSILAFLPGQAEITRTAERLQ
GRFGPETLIAPLYGNLGQKEQDAAIQPAAAGMRKIVLATSIAETSITIDGVRIVIDSGLQ
RLPVFEASTGITRLETVRVSRASADQRAGRAGRTEPGIAVRLWHQGQTAALPAFTPPQIL
SSDLSGLMLDLAHWGVQDPASLAFVDQPPETTLKEARMLLGQLGALDKDGMLTARGKVMR
DLALPPRLAAMVVSAGESGHARDAALIAVLLTEQGLGGTSLDIEERLRRFKAERGERAEA
ARRLAGRLASGLDRVEAAAPALTGQLLLHAFPDRIALQRGGRGRFVMANGRGAELPETER
LAGSRMLVIADLTGRAAQGRVLAAAEVTRGDIEAELPGEIRTDDQIFFDRQSRQVRARRA
TRLGAIIFDETPLPRPSGAVVTQALMEGVRELGLDQLAFSKEAIQLRERIGFLHRTIGDP
WPDVGDAALLSRLDEWFAPFQSEARGLSDISAGGLSAGLMSLVPHELQRDLSRLAPTHFE
APTGQRHPIQYEGAEPVLTIRVQELFGLKQHPAIAGGRLPLLLELTSPAHRPIQTTRDLP
GFWAGSWRDVRAEMRGRYPRHPWPERPEEALPTTRAKPRGT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcagtccttcattgccggaacttccggtttcccatgtcctgccggctatcggc
gtggcgttggccgagcacaagcgcgcggtactttcggcaccgcccggcgccggcaaaacg
accttggtgccgctttacctgctcgaacaagcctggcgcggcgacggcaggatcatcctg
ctggaaccgcggcggctggcagcccggacggcggcaagccggatggcatcgctgatcggt
caacaggtcggcggcacggtcggctaccgcatgcgcctcgacaacaggatctcggcggcg
acacggatcgaagtggtgacggaaggggtttttgcccggatggtcctcgatgatcccgaa
ctctccggcgtttcgaccgtgatcttcgacgaattccacgagcgttcgctcgatgccgat
ttcgggctggcgctggcgctcgatgtccagtccgccttgcgcgaggatctgcgcctcctt
gtgatgtcggcgacgctcgacatcgagcgtgtggccgccctgcttgaagatccgcctgtc
atcgaaagcctgggacgcagctttcccatcgatatccgttaccaggatcggccgggcggc
gaacgcatcgaagatgccgtgacgcgggcgattgtggaggcgcatgccagcgaaaccggc
tcgatccttgctttcctgcccggccaggcagaaatcacgcggaccgcagagcggctgcag
ggacgattcggccccgaaacgctgattgcgccgctttacggcaacctcggccagaaggag
caggacgccgcgatccagcccgcagccgccggtatgcgcaagatcgtgcttgcgacatcg
attgccgaaacctcgatcaccatcgacggcgtgaggatcgtcatcgacagcgggttgcag
cgtctgccggtgtttgaggcatccaccgggatcacccgtcttgagacggtgcgcgtatcg
agggcttcggccgatcaacgcgcgggccgcgccgggcgaacggaaccgggcatcgccgtc
aggctgtggcaccagggacagacggcggcgctgccggccttcacgccgccgcagatcctc
tccagcgatctttccgggctgatgctcgatctcgcgcattggggcgttcaggacccggca
tctctcgcctttgtcgatcagccgccggaaaccacgcttaaggaagcgcggatgctgctt
ggccagctcggcgcgctcgacaaggacggaatgctgaccgcgcgcggcaaggtcatgcgc
gatctcgccctgccgccacggcttgccgcgatggtcgtgtcggcgggcgaatcggggcat
gcccgggatgcggcattaatcgccgtgctgctgaccgaacaggggctcggcggaacgagc
ctcgatatcgaggagcggctgcggcgcttcaaggccgagcgcggcgaaagggcggaggcc
gcgcggcggctggcaggacggctggcgagcggcctcgacagggttgaggcagcggcgccg
gctctgacggggcagctgctgctgcatgccttccctgacagaatagcgcttcagcgcggc
gggcgcggacgattcgtgatggccaacgggcggggagcggagctgccggaaaccgagcgg
ctggccggcagccggatgctcgtcatcgccgatctcaccggccgggcggcgcaggggcgc
gttttggcggccgccgaggtgacgcgcggcgatatcgaagccgagttgcccggcgaaatc
agaaccgacgaccagatattcttcgatcggcagagccggcaggttcgggcgcggcgcgcc
acccggctcggcgcgatcatcttcgacgagacgcccctgccgcggccttccggggcagtc
gtgacccaggcgctgatggaaggcgtgcgcgaactcgggctcgaccagcttgctttctcg
aaggaagccattcagcttcgcgagcggatcggtttcctccacaggacgatcggcgatccc
tggcctgatgtcggcgacgccgcgctgctttcccgactggacgaatggttcgcgccgttt
cagagcgaggcccgcggcctctcggacatatcggcgggcgggctctccgccgggctgatg
tcgctggttccgcacgaattgcagcgtgatcttagccggcttgccccgacgcatttcgag
gcgccgaccggccaacggcatccgatacaatacgagggtgcggagcccgtgctgaccatc
cgcgtgcaggagctgttcgggctcaagcagcacccggcgattgccggaggccgcctgccg
ctgctgctcgaactgacgtcgccggcgcaccggccgatccagaccacacgcgacctgccg
ggcttctgggccggctcatggagggacgtgcgcgccgagatgcgcggacgctacccacgc
catccgtggccggagcggccggaagaggcattgccgacgacacgggcaaagccgcgtggt
acatga
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