Rhizobium phaseoli: AMC79_CH02996
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Entry
AMC79_CH02996 CDS
T04590
Name
(GenBank) exonuclease RNase T/DNA polymerase III protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03030
DNA replication
rpha03430
Mismatch repair
rpha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMC79_CH02996
03430 Mismatch repair
AMC79_CH02996
03440 Homologous recombination
AMC79_CH02996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpha03032
]
AMC79_CH02996
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH02996
Enzymes [BR:
rpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMC79_CH02996
DNA replication proteins [BR:
rpha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMC79_CH02996
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMC79_CH02996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANL98770
LinkDB
All DBs
Position
complement(3028286..3028906)
Genome browser
AA seq
206 aa
AA seq
DB search
MAGETIRYAALKTIAIDFETANEQRGSACSVGLAWIEEGRVTRVEERLIRPRDMRFSGMN
IAIHGIRPEHVEDAPEFPEVMDEFHEDISGATMIAHNAAFDFSVWRASLDLYRQSYPELT
YLCSLKMAQRIWPHFLSHRLNLIAEHLGLRFMHHNAAEDAAVCAAAAIEMAKAVKAKAVA
AIPALIGMTPGRLTARGYAPCTCRKA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtggccggggaaacgattcggtatgcagcattgaagaccattgcgattgatttcgagacg
gcaaacgagcagcgcggcagcgcctgttccgtcggcctcgcctggatcgaagagggcagg
gtgacgcgcgtcgaggaacggctgatccggccgcgcgacatgcgcttttccgggatgaat
atcgccatccacggcatccggccggagcatgtcgaggatgcgcctgagtttcccgaggtg
atggacgagtttcatgaggatatcagcggcgcgacgatgatcgcgcacaacgcggccttc
gatttcagcgtctggcgggcgagcctcgatctctaccggcaatcctatccggaactcacc
tatctttgcagcctgaagatggcgcagcggatctggccgcatttcctctcccatcggctg
aacctgatcgccgagcatctcggcctgcgtttcatgcaccacaacgccgccgaggatgct
gcggtctgtgcggcagcggcgatcgagatggccaaggcggtaaaggcgaaagccgtcgcg
gcgatcccggcactaatcgggatgacgcccggacggctgacggcgcgtggctacgcgcct
tgcacctgccgaaaggcctga
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