Rhizobium phaseoli: AMC79_CH03006
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Entry
AMC79_CH03006 CDS
T04590
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00470
D-Amino acid metabolism
rpha00550
Peptidoglycan biosynthesis
rpha01100
Metabolic pathways
rpha01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMC79_CH03006 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMC79_CH03006 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AMC79_CH03006 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpha01011
]
AMC79_CH03006 (ddl)
Enzymes [BR:
rpha01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AMC79_CH03006 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpha01011
]
Precursor biosynthesis
Amino acid ligase
AMC79_CH03006 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
GARS_A
ATP-grasp_3
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
ANL98779
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All DBs
Position
complement(3040698..3041624)
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AA seq
308 aa
AA seq
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MSRKHVAVLMGGFSSERPVSLSSGKACVAALEAEGFKVTCIDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKLVAAAAGIPVAESQVINR
FAFPSTHPMKPPYVVKPVREGSSFGVVIVTEDQAHPPQVVSSPEWHYGEDVLVERYVYGR
ELTCGVMGDVALGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaacggcccgtcagc
ctttcctcgggaaaggcttgcgtagcagccctcgaagccgaaggcttcaaggtgacatgc
atcgatgtcgcgcgcgacgtttccgagaagcttgcggcgctgaagcccgatgtcgtcttc
aacgcgcttcacggaccctttggtgaggatggcaccattcagggcatcctcgaatatctc
gagatcccctatacacattcgggtgtgcttgcctcggcgctggcgatggacaaggacaag
gcgaagctcgtcgctgccgctgccggcattccggttgccgaatcacaggttatcaatcga
ttcgcctttccttcgacgcatccgatgaagccgccctatgtggtgaagccggttcgcgag
gggtcgagcttcggcgtcgtcatcgttaccgaagatcaggcgcatccgccgcaggtcgtc
agttcgcccgagtggcattatggcgaggatgtcctcgtcgagcgctacgtctacggccgc
gagctcacctgcggcgtcatgggcgacgtcgcgcttggtgtcaccgaggtggtgccgcag
ggacacaatttctatgattacgattccaagtatgcagcgggcggttcaaaacacgtcatc
ccggcaaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagccaggcatgactcctacctcg
ctcgtgcccgaaatggccggccatgccggttattcctttggtgagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga
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