Rhizobium phaseoli: AMC79_PB00326
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Entry
AMC79_PB00326 CDS
T04590
Name
(GenBank) DNA polymerase III subunit epsilon protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03030
DNA replication
rpha03430
Mismatch repair
rpha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMC79_PB00326
03430 Mismatch repair
AMC79_PB00326
03440 Homologous recombination
AMC79_PB00326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpha03032
]
AMC79_PB00326
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_PB00326
Enzymes [BR:
rpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMC79_PB00326
DNA replication proteins [BR:
rpha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMC79_PB00326
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMC79_PB00326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANM00740
LinkDB
All DBs
Position
pRphaN261b:complement(356855..357805)
Genome browser
AA seq
316 aa
AA seq
DB search
MFAKPSPAAAKVRAPSRRPPSQLDARSDEDMARALEESGNYRILRKLIGRPIASVRRSEF
SRLGVVLDTETTGLNHRSDEIIEIGAVAFTFDDDGAIGDIVGIYGGLQQPSRPIPPEVTR
LTGITDAMVEGQVIDIRSLSALIEPADLIIAHNAGFDRPFCEAFSSLFTGKAWACSVAEI
DWSARGFEGTKLGYLVGQAGYFHEGHRAVDDCHALLEILDRQQGEGESPFAELYRASQRS
RIRIFAEHSPFEMKDHLKARGYRWSDGSDGRLKSWWIEVGEDDLGDELSYLRAEIYRWRE
ADPPTVRLTAFDRFKS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagccgtcgccggcggcggcgaaggtgcgcgctccatcgcgccggccgccg
tcgcagctggacgcccgctccgatgaagacatggcgcgcgcgcttgaagagagcggcaac
taccgcattctcaggaaactgatcggccgtccgatcgcatcggtcagacggtcggaattt
tcgcggctcggcgtcgttctcgacacggaaacgacgggtctcaaccatcgcagcgacgag
atcatcgaaatcggcgccgtcgcctttacattcgacgacgacggcgcaatcggcgatatc
gtcggcatctatggcggcctgcagcagccgtcgcggccgatcccgcccgaggtcacccgg
ctgacgggaattaccgatgcgatggtcgaaggacaggtgatcgacatcagatcgctcagc
gctctgatcgaacccgccgatctgatcatcgcccacaatgccggtttcgaccggccgttc
tgcgaggccttctcgtcgctcttcaccggcaaggcctgggcgtgttcggtggcggaaatc
gactggagcgcgcgtggcttcgagggcaccaagctcggctacctcgtcggccaggccggt
tatttccatgaaggccatcgcgcggtggacgactgccacgcgctcttggaaatcctcgac
cgacagcaaggtgagggtgaaagcccctttgccgagctctaccgggccagccagcgctca
cgcatccgcatcttcgccgaacacagccccttcgaaatgaaggaccatctgaaggcgagg
ggctatcgctggtctgacggaagcgacggccgactgaagtcctggtggatcgaagtcggc
gaagacgatctcggcgacgagctttcctatctgcgcgcagaaatctacagatggcgagag
gcggatccgccgaccgtgcggctgacggccttcgatcgtttcaaatcctga
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