Ralstonia pickettii 12J: Rpic_2435
Help
Entry
Rpic_2435 CDS
T00762
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03030
DNA replication
rpi03410
Base excision repair
rpi03420
Nucleotide excision repair
rpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpic_2435
03410 Base excision repair
Rpic_2435
03420 Nucleotide excision repair
Rpic_2435
03440 Homologous recombination
Rpic_2435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpi03032
]
Rpic_2435
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_2435
Enzymes [BR:
rpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpic_2435
DNA replication proteins [BR:
rpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rpic_2435
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rpic_2435
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rpic_2435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACD27569
UniProt:
B2U939
LinkDB
All DBs
Position
1:complement(2541264..2544077)
Genome browser
AA seq
937 aa
AA seq
DB search
MSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACI
FDAKGKTFRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVVEGVEADDVIGTL
AERAAREGVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPAGVQAKFGVPPERIVDYLS
LIGDTVDNVPGVPKVGPKTAVKWLTEFGSLDNVIAHAGEIKGVVGENLRNTLEWLPKGRE
LLTVKLDCNLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASGEALPDTRSVGAA
RNAATPVKNYAGEAAQLQAQANLFDVEAPPDEIKYETVTTEAQLESWMQRLDEVDLVCID
TETTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGFDAAAQLSRDTVLARMKLWLE
DESRKKVGQHLKYDAHVFANHDIALRGIEHDTMLESYVLESHRNHGMDALAERVLHLKTI
TYEAVCGKGASQIGFDEVPLDRATEYAAEDADVTLRLHRTLFPKVAEDDKLRYVYEQIEM
PASIVLQKMERNGVLIDADRLAKQSNELGLRLIDLEAEAHKLAGQPFNLSSPKQIGDIFF
NQMKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNPR
TGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQIEL
RIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGMSAF
GLASNLGIGRDAAKLYIDRYFARYPGAASYMDETRQRAREQGYVETVFGRRLWLPDINGG
NGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLDAEAMRSRLVMQVHDELVLEVPQD
ELAVVRERLPELMCSVATLRVPLVAEVGVGANWEEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatttgtaccgtgcc
tatcacgcactgcccgacttgcgaaacggggaagggtttcctacgggggccatctacggc
atcgtgaacatgctgcgcaaactgcgcaacgactacccggccaagtatagcgcttgcatt
ttcgacgccaaaggcaagacctttcgcgatgacctctatccggcctacaaggagcatcgc
gcgcccatgcccgatgacctgcgcgcgcagatcgaaccgatccacgaagccgtgcgggca
ttgggttggcccatcctggtggtcgaaggtgtcgaggccgacgatgtgatcggcaccctg
gctgaacgggctgctcgcgaaggcgttcgcaccatcgtctcaacgggtgataaggacctc
gcccaactggtgaatgaccacgtgacgctggtcaacaccatgaccaacgaaacgctcgat
ccggccggcgtgcaagccaagtttggcgtgccgcccgagcgcatcgtcgactatctttcg
ctgattggcgacaccgtggacaacgtgcccggcgtgccgaaggtgggcccgaaaaccgcg
gtgaaatggttgacggagttcggctcgctcgacaacgtcatcgcgcatgcaggcgagatc
aagggcgtggtgggcgagaacctgcgcaacacgctcgaatggcttcccaagggccgcgaa
ctgctgaccgtgaagctcgactgcaacctcagcaaagaggtgccgacattcgatgcgctg
atcgacggcggcgaagataaatccaagctcgtcgatttcttctcgcgttacggtttcaag
acgtggctgcgcgaggcttccggtgaagcgctgcccgatacgcgcagcgtcggggccgcg
cgcaacgccgcgacgcccgtgaagaattacgccggcgaggccgcacaactgcaagcacag
gccaacctgttcgacgtggaagcgccgcccgatgagatcaagtacgagacagtgacgacc
gaggcgcagcttgaatcgtggatgcagcgcctggacgaagtggatctcgtctgcatcgac
accgagacgacgtccatcgacccgatgctcgcgcagttggtggggatttcgctgtcggtc
aagccgggcgaggcctgctacatcccggtggcacatcgtggcccggatgtcgccgggttt
gatgcggcagcgcagctctcgcgcgacacggtgctcgcgcgcatgaagctgtggctcgaa
gacgaatcacgcaagaaggtcggccagcatctgaagtacgacgcgcacgtgtttgccaac
cacgacatcgcgctgcgcggcatcgagcacgacacgatgcttgaatcgtacgtgctcgag
tcccaccgcaatcacggcatggatgcactggccgagcgggtgctgcatttgaagacgatc
acttacgaggccgtgtgcggcaagggcgcatcgcagatcggctttgacgaggtgccgctc
gatcgcgcgaccgagtacgcagcggaagacgccgatgtcacgctgcgcctgcatcgcacg
ctgttccccaaggtggccgaagacgacaagctgcgctacgtctacgagcagatcgaaatg
cccgcctccatcgtgctgcagaagatggagcgcaacggcgtgctgatcgatgccgaccgc
ctggccaagcagagcaacgagctgggcctgcgcctgatcgatctggaagccgaggcacac
aagcttgcgggtcagccgttcaacctcagctcacccaagcagatcggcgacatcttcttc
aatcagatgaagcttccggtcatcaagaagaccgcgagcggtgcgccgtcgacagacgag
gaggtactgcagaagctggccgaagactacccgctgccgaagctgctgctcgattaccgg
ggcctggccaagctcaaatcgacctacaccgacaagctgccgaagatggtcaacccgcgc
actggccgggtccacaccacctacggtcaggcgacggcggtgacggggcgcctggcctcg
accgatccgaacctgcagaacattccagtgcgcacggaagaagggcggcgcattcgcgag
gcattcatcgcgccggagggcagcgtcatcgtgtcggccgactactcgcagatcgaactg
cgcatcatggcccatctgtcgcaggacgaaggcctgatgcgcgcattccgtgagggccag
gacgttcaccgcgcgaccgctgctgaagtgttcaacgtgacgccgctggaggtgacgccc
gatcagcgccgtgtggccaaggtcatcaacttcggcctgatctacgggatgagcgcgttc
gggctggcgagcaacctgggcattgggcgcgatgcagccaagctctatatcgaccgctac
ttcgctcgctaccccggcgccgcgagctacatggacgaaacccggcagcgggcgcgcgag
caaggctacgtggagaccgtctttggccgtcgcctgtggctgcccgacatcaatggcggc
aacggcccgcgccgtcaggctgccgagcgcgccgccattaacgcgccgatgcaaggcacg
gcggctgacctgatcaagctgtcgatgctggcagtgcaaggctggctcgacgcggaagcg
atgcgctcgcgcctggtcatgcaggtgcacgatgaattggtgctggaagtcccgcaggac
gaactggccgtggtgcgcgagcgtctgccagagttgatgtgcagcgtcgcaacgctgcgc
gtgccgctggtggccgaggtcggcgtgggcgcgaactgggaagaagcgcactga
DBGET
integrated database retrieval system
