Ralstonia pickettii DTP0602: N234_35470
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Entry
N234_35470 CDS
T03172
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj00984
Steroid degradation
rpj01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
N234_35470
Enzymes [BR:
rpj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
N234_35470
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Gene cluster
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Pyr_redox
HI0933_like
GIDA
Thi4
Fer4_8
ApbA
Motif
Other DBs
NCBI-GeneID:
17106997
NCBI-ProteinID:
AGW95365
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Position
3:229710..231314
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AA seq
534 aa
AA seq
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MMSDALAYDVVVIGSGFGGAVSACRLAKAGRKVLVLERGRRWSPATYPRDESDAWLWNQE
RAHRFNGWADIRTFSDVWVIAGAGVGGGSLIYANVSVEAKPEAFEHGWPKEVTYADLQPH
YEQVGRMLAVSEVPDNQLSERARLLREGAEACGWGGRFRKLPLAVSFSEHWDPTRQDARD
DRHSEKFLNQHGRWQGTCVHCGNCDVGCQVSARNTLDLNYLAVAEDNGAEIRPLHLVDRL
EPLQQGWRVCFRKIDPEDRTTSPGEVTAARVILAAGSIGSTELLLRCRDEHRTLPRLSPR
LGFGWAHNGDFVTPAFYDDRTVSPSHGVTISAAIDLLDHSGPNGQALFVEDGGIPNLAGN
FIRRHLKKARSRKLRAVWKEVGGLFDDGDPIERMMPWFGQGVDPGDGQLRLGRMWYAPWR
RVLRLDWSYQASVAVIDAMIAAHTQLSEATGGDPWVPLTWRRWHNLITPHPLGGCNMGTS
AADGVVDAWGRAFGYKGLYVMDGAIVPRPLGLNPSRTIAALAERNVVMLLREQD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcgcttgcctacgatgtcgtcgtcattggcagcggcttcggtggtgcg
gtctcggcctgcaggctcgcgaaggccggccgcaaagtgctggtgctggagcgcggccgg
cgctggagcccggcgacctatccgcgcgacgagagtgacgcgtggttgtggaaccaggag
cgcgcacatcgcttcaatgggtgggccgatatccggacattctctgatgtatgggtcatc
gccggggccggtgtcggtggcggctcgctgatctacgccaacgtttccgtggaagccaag
ccggaagccttcgagcacggctggccgaaagaggttacctatgccgacctgcagccccac
tacgagcaggtcgggcgcatgctcgcagtgagcgaagttccggataaccagttgagcgag
cgggcccggctattgcgcgagggggcggaagcatgcggatggggcgggcgcttccgcaaa
ctgccgcttgcagtgtcattttccgagcattgggaccccacacggcaagacgcccgcgat
gaccgtcattccgagaaattcctgaatcagcatggcaggtggcagggcacttgtgtccat
tgcggcaactgcgacgttgggtgccaggtatcggccaggaatacgctggacctgaattac
ctggcggtggctgaagacaatggcgccgagattcgtccattgcacctggtggacaggctc
gagccgctgcagcagggctggcgggtatgcttcaggaaaatcgacccggaagaccgaacg
acgagccccggcgaagtcacggccgccagggtgatcctggccgccggctctatcggcagc
accgagcttctgctgcgctgtcgggatgagcatcgcactctgccccggctttcacctcgg
ttgggatttggctgggcccacaatggcgacttcgtgacgccagccttctatgacgacagg
acggtctccccttctcatggcgtgaccatctccgccgcgatcgacctgctagaccacagc
ggcccgaacggacaggcgctcttcgtggaggacggtggaatcccgaacctcgcaggcaac
ttcattcgacgccacttgaagaaagcgcgttcccgcaagctgcgcgctgtttggaaggag
gtcggaggactgtttgacgacggcgatccgattgagcgaatgatgccctggttcgggcaa
ggcgtagacccgggcgatggccagttgaggctgggccgcatgtggtacgcaccgtggcgt
cgtgtgctgcggctcgactggtcctatcaggcatcggtggccgtcatcgatgccatgatt
gcagcgcatacgcagctctcggaagcaactggcggggatccgtgggtgccgctcacctgg
cgacgatggcacaacctgatcacaccgcacccgctgggaggctgcaacatgggcacctcc
gccgcggacggagtcgtcgatgcatggggcagggcatttggctacaaaggactgtatgtc
atggacggtgcgatcgtcccgcgtccgctcggcctgaacccttcgcgtaccatcgccgcg
ctcgcggagcgtaacgtggtcatgctcttgcgcgagcaagattaa
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