Raoultella planticola: B1209_25710
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Entry
B1209_25710 CDS
T05298
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpln
Raoultella planticola
Pathway
rpln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1209_25710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpln03021
]
B1209_25710
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_25710
Enzymes [BR:
rpln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1209_25710
Transcription machinery [BR:
rpln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1209_25710
DNA repair and recombination proteins [BR:
rpln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1209_25710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AUV55624
UniProt:
A0A2X2EA08
LinkDB
All DBs
Position
complement(5328397..5332425)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIK
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKIYVEKARRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFGRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKQQQEVAK
LREFIQKAYDLGTDVRQKVDLNTFTDDEVLRLAENLKKGMPIATPVFDGAKESEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccgcag
gttctggacataccttatctcctttccatccagcttgactcgtttcagaagtttatcgag
caagatcctgaagggcagtacggtctggaagctgctttccgttccgtgttcccgattaaa
agctacagcggtaactctgagctgcaatacgtcagctaccgtctgggcgaacctgttttt
gatgttaaagaatgtcagatccgtggcgtgacctactcggcaccgctgcgcgttaaactg
cgtctggtgatctacgagcgtgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtacctttgttatcaacggt
actgaacgtgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgactctgac
aaaggtaagactcactcttccggtaaggtcctgtataacgcacgtatcattccttaccgc
ggttcctggctggacttcgagttcgatccgaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgccggccaccatcatcctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgagaaagtggtctttgaaattcgcgacaacaagctgcagatggaa
ctggtaccggagcgtctgcgcggtgaaacggcttccttcgacatcgaagcgaacggcaaa
atctacgtcgagaaagcccgtcgcattaccgctcgccatatccgtcagctggaaaaagac
gatatcaagcatatcgaagttccggttgaatatattgcgggtaaagttgcggccaaagat
tacatcgatgaagccactggcgaactgatctgcccggcgaacatggagctgagcctggat
ctgctggcgaaactgagccagtccggtcacaagcgcatcgagaccctgttcaccaacgat
ctggaccacggtccgtacatttctgaaacggtacgcgtcgacccgactaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgcccgggtgagccgccgactcgtgaagcg
gctgaaagcctgtttgagaacctgttcttctccgaagaccgctacgatctgtctgcggta
ggtcgtatgaagttcaaccgttctctgctgcgtgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccaccttggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtggagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgca
gcagtgaaagagttctttggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtccgagattacgcacaagcgtcgtatctccgcactcggcccaggcggcctgacccgt
gaacgtgcgggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggcttcctcgagactccgtatcgtaaagtgaccgacggtgttgtgacc
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggtgacctgccgtagcaaaggc
gaatccagcttgttcagccgcgatcaggttgactacatggacgtttccacccaacaggtg
gtttccgtcggtgcgtcactgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgtcgactccggtgttactgcagttgctaagcgt
ggcggtaccgtacagtacgtcgatgcatcccgtatcgttatcaaagttaacgaagatgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaagtacacccgttctaac
cagaacacctgcatcaatcagatgccttgcgtgtccctgggtgagccaattgagcgcggc
gacgtgctggcagacggtccgtccaccgaccttggtgaactggctctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggctacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccacgattcatattcaggaactggcgtgtgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgatatcccgaacgtgggtgaagct
gcgctctctaaactggatgaatccggtattgtttacatcggtgcagaagtgaccggcggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgcgatcttcggcgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcacccgcgatggcgtggaa
aaagacaaacgtgcgctggaaatcgaagagatgcagctgaagcaggccaaaaaagacctg
tctgaagaactgcagatcctcgaagctggcctgtttggtcgtatctacgcggtgctggtt
gccggtggtgttgaagctgagaagctcgacaagctgccgcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtacgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccgggcgtgctgaagattgttaaagtgtatctggccgttaaacgtcagatt
cagccgggtgacaaaatggcaggtcgtcacggtaacaagggtgttatttctaagatcaac
ccgatcgaagatatgccttacgatgaaaacggtacgccggtcgacatcgtactgaacccg
ctgggcgtaccatctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcgaaaggcatcggtgagaaaatcaacgcgatgctcaaacagcagcaggaagtcgccaaa
ctgcgcgagttcatccagaaagcgtatgacctgggtaccgatgttcgtcagaaggtcgat
ctgaataccttcaccgatgatgaagttctgcgtcttgctgaaaacctgaaaaaaggtatg
ccgatcgccacgccggtattcgacggtgcgaaagagtctgaaatcaaggaactgttacag
ctgggtggcctgccgacttccggtcagatcactctgttcgacggtcgtaccggcgagcaa
ttcgagcgccaggttaccgttggctacatgtacatgctgaaactgaaccacctggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagct
tacggcgcagcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtcaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggaaccgggcatgccg
gaatccttcaacgtattgttgaaagagattcgctcgctgggcatcaacatcgaactggaa
gacgagtaa
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