Rodentibacter pneumotropicus: NCTC8284_01948
Help
Entry
NCTC8284_01948 CDS
T05800
Gene name
kdsA
Definition
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00540
Lipopolysaccharide biosynthesis
rpne01100
Metabolic pathways
Module
rpne_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC8284_01948 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
NCTC8284_01948 (kdsA)
Enzymes [BR:
rpne01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NCTC8284_01948 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rpne01005
]
Lipid A
NCTC8284_01948 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Cas_DxTHG
Motif
Other DBs
NCBI-ProteinID:
VEH66768
UniProt:
A0A3S4TVC1
LinkDB
All DBs
Position
1:1196158..1197012
Genome map
AA seq
284 aa
AA seq
DB search
MQNKLVKIGHIEVANDKPFVLFGGMNVLESRDMAMQVCEAYVKVTEKLNVPYVFKASFDK
ANRSSIHSYRGPGMEEGLKIFQELKTTFGVRIITDVHEIYQCQPVADVVDVIQLPAFLAR
QTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIEECGNDKVILCDRGTNFGYDNLIVD
MLGFGVMKKVSKGNPVIFDVTHSLQCRDPFGAASGGRREQVTELARSGLAVGLAGLFLEA
HPNPNQAKCDGPSALPLSALEGFVSQMKAIDDLVKSFPELDTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaacttgtaaaaattggtcacattgaggtggcaaatgacaaaccttttgta
ctttttggcggaatgaatgtacttgaaagtcgtgatatggcaatgcaagtgtgtgaagcc
tatgtgaaagtaaccgaaaaactcaatgtaccttatgtatttaaagcctcttttgacaaa
gccaatcgttcatctattcactcataccgtggaccgggtatggaagaaggcttaaaaatt
ttccaagaattaaaaactacatttggggtgagaatcatcacagatgttcatgaaatttat
caatgccagccggtggcggacgtggtagatgtgatccagctccctgcatttttagcccgt
caaacggatctggtggaagccatggcgcgtacaggagcggtgattaatgtgaaaaaacca
cagtttttaagtccgggtcaaatgggaaatattgtggaaaaaatcgaagaatgtggtaat
gataaagttattctttgcgatcgcgggacaaattttggctatgataatttaatcgttgat
atgcttggtttcggcgtgatgaaaaaagtatcaaaaggtaatcctgtgatttttgatgta
acccattcactacaatgtcgtgatccgtttggtgcggcatcgggcggtcgccgtgagcaa
gtgacggagcttgctcgttcaggtttagcggtggggcttgccggtttatttttagaagcg
catccgaatccgaatcaagcaaaatgtgatggtccatcagccttaccgttgtctgctttg
gaaggttttgtctcacaaatgaaagccattgacgatttagtcaaatctttccctgaattg
gatacgtcaatttaa
DBGET
integrated database retrieval system
