KEGG   Rodentibacter pneumotropicus: NCTC8284_02664
Entry
NCTC8284_02664    CDS       T05800                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rpne  Rodentibacter pneumotropicus
Pathway
rpne00740  Riboflavin metabolism
rpne01100  Metabolic pathways
rpne01110  Biosynthesis of secondary metabolites
rpne01240  Biosynthesis of cofactors
rpne02024  Quorum sensing
Module
rpne_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:rpne00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NCTC8284_02664 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCTC8284_02664 (ribD)
Enzymes [BR:rpne01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NCTC8284_02664 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NCTC8284_02664 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: VEH67467
UniProt: A0A448MQP2
LinkDB
Position
1:complement(1604401..1605522)
AA seq 373 aa
MSDQFTAQDYQFMQRALDLAAKGVYTTTPNPAVGCVLVKNGEIVGEGFHFKAGQPHAERV
ALAQAGEKAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMEDPNPQVAGKGLKM
LAEAGIESAVNLLKDSTEKLNKGFLKRMREGKPFVQLKLAMSLDGKTAMASGESKWITGV
ASRADVQKMRAKSSALLSTSATVLADNPSLNVRWEDFSNDLKKEYVKDTLRQPVRVILDS
QHRIQPSHKLFETDAPVWLVSSEARDLANFPDFCEQIILPKENLLSELMIELGKRQINTL
WSEAGKNLAGSLIEQKLVDELILYIAPKLLGEKARSLCSLPHLTQLADAPLWQLDKVQQI
GDDIKLIYTPKGS
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtcggatcaatttaccgctcaagattatcaatttatgcaacgagctttggatttagcg
gcaaaaggcgtttataccaccacgccgaatcctgccgtgggctgtgttttggttaagaat
ggtgagatagtgggggaaggttttcattttaaggcggggcagccccatgcggaacgggtt
gctcttgcacaagcgggtgaaaaagcaaaaggcgcaactgcttatgttactttggaacct
tgctcccattatggccgaacgccaccttgtgcattaggtttgattgaagcaggggttgtg
aaagtgatcgctgcgatggaagaccctaatccacaagtggcgggtaagggattgaaaatg
ctcgctgaagcgggcattgaaagtgcggtcaatttattaaaggattctacggaaaaactc
aacaaaggttttttaaagcgtatgagggaaggaaagccttttgtccaactcaaattagcc
atgagtcttgatggtaaaactgccatggcaagcggagaaagcaaatggattaccggagta
gcctcacgtgcagatgtgcaaaaaatgcgggcaaaatcgtccgcacttttatccacgtct
gccactgttttagccgataatcccagtttaaatgtacgttgggaagatttttccaatgat
ctcaaaaaagaatatgtgaaagatacgctacgtcagccggtgcgtgttattttagattcg
caacatcgtattcagccaagccataaattatttgaaacagacgctccggtgtggttggtc
tcaagtgaagcgcgtgatctggcgaattttcccgatttttgtgaacaaattattttacct
aaagagaatctcttatccgaattaatgattgaattaggcaaacgtcaaattaataccctt
tggagcgaggcaggaaaaaatttagccggtagcttgattgaacaaaaattggtggacgaa
ttgatcctttatattgccccgaaattattaggcgaaaaagcccgtagtctgtgcagtttg
cctcatttaacacaattagccgatgcccctctgtggcaacttgacaaagttcaacaaatt
ggtgatgacataaaattaatttacacaccaaaaggatcttaa

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