Roseobacter ponti: G3256_00290
Help
Entry
G3256_00290 CDS
T06561
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rpon
Roseobacter ponti
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpon03400
]
G3256_00290 (addB)
Enzymes [BR:
rpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3256_00290 (addB)
DNA repair and recombination proteins [BR:
rpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G3256_00290 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJF49711
UniProt:
A0A858SPU2
LinkDB
All DBs
Position
60206..63154
Genome browser
AA seq
982 aa
AA seq
DB search
MGDAPGTRGLYGLACGVDFPRALVDGLLQRFADAPPEALARITLVVNTTRMRRRLHQLFH
EKQALLLPKICLITEPDRIDAAVTLPPAVPPLRRRLELIALVSRLLHSQPDLAPRASLYG
LTDSLAALMDEMQGEGVPAEKLAGLDVSDQSGHWQRAQEFIRIAQDYLADTTTLPDSEAR
QRAMVETLATRWETRPPAHPVIIAGSTGSRGTTLLLMQAVAGLSNGAIVLPGFDFDQPAE
VWEQLRDGMVSEDHPQYRFHRLMQMTGQRPSDITPWHDTPPPSPARNALISLSLRPAPVT
DAWLSEGPALTGIAKATSGITLLEAPGPRQEALTIAMRLRQAAEEGIAAALITPDRMLTR
QVTAALDQWNILPDDSAGSPLHLSPPGRFLRHISRLFHQRLDAAGLLTLLKHPLTHSASA
RNAHILNTQRLELRIRRDGLPFPDRDGLLRLMHRDMERYEGLGDWVIWVADTFTDRQTPG
DHPLPDLVARHLALAEAAARGPGGPDSGELWQKKAGQEARATMQRLTDQARFGSDMSAAD
YADLSGALLAEGEVRDRDAPHPGIMIWGTLEARVQGADLVILAGLNDGTWPETPAPDPWL
NRAMRHKAGLLLPERRIGLAAHDYQQAVGATEVWLTRAIRSDDAETVASRWLNRLGNLLA
GLEGNGGVTALEAMRQRGAAWLARADALEKPRPVPAAARPSPRPPRAARPDALSVTEIKR
LIRDPYAIYARHVLGLRPLGPLVQSPDHLMRGIVVHDILEQFIKDTLVTPEALTAEHLSH
VAQQMLRDGVPWPAERTLWQALLNRTAPGFVTAEIARRARGTPAALEDAATGKLVWQDPP
FTLTARADRIDLAPDGAALIYDYKTGSVPSRKQQAQFDKQLLIEAAMIEEGVLGLADPHP
VREAVFIGLGSDMKEVAAPLDDEPPAVVLAKLRALIRAYLDPGQGFTARRMMEKDAYGSD
YDLLARFGEWDATDAPVPEDLK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgcgccgggcaccaggggtctttacggtctcgcctgcggggtcgatttcccc
cgcgcgctcgtcgatggtcttctgcagcggtttgcggatgccccgcccgaggcactggcg
cggatcacactggttgtgaacaccacacggatgcggcggcggctgcaccaactctttcat
gaaaaacaggccctgttactgccaaaaatctgtctgatcacggaacctgacaggattgac
gcggcggtcacgctgcccccggcggttccacccctgcgccgcaggctggagctgattgcg
ctggtatcccgactgctgcacagccagccggatctggcgccgcgcgcctctctttatggc
ctgaccgacagccttgccgcgctgatggacgagatgcagggcgagggcgtaccggccgaa
aagcttgccggtctggatgtctcggatcagtccggccactggcagcgggcgcaggaattt
atccgcattgcgcaggattatcttgccgataccaccaccctgccggacagcgaggcgcgg
caacgggcgatggtcgaaaccctggccacccgctgggagacgcgcccgccggcccatccc
gtgatcattgccggctccaccggatcgcgcggcacgacgcttttgctgatgcaggccgtc
gcaggtctgagcaatggcgctattgttctgcccgggttcgattttgatcagccggcggag
gtatgggaacagctgcgcgacggtatggtgtccgaagatcatccgcagtaccggtttcac
cggctgatgcagatgaccgggcagcggccctccgacattaccccctggcatgacacgccg
ccaccgtcgccggcgcgtaatgcgctgatctcactgtcgctgcgtcccgcgcccgtgacc
gacgcctggctttctgaagggccggcactcaccggcatcgcaaaggccacctccggcatc
acgcttcttgaggctccgggcccccggcaggaggcgctgaccatcgcaatgcgcctgcgc
caggccgccgaagagggcattgccgccgctcttatcacacctgaccggatgctcacccgc
caggtcaccgcagcactggatcagtggaacattctgcccgacgattccgctggcagcccg
ctgcatctgtctcccccggggcggtttctgcgccatatctcccggctctttcaccagcgg
cttgacgctgcgggtctgctgaccctgctcaagcacccgctgacccactctgccagcgcc
cgcaatgcgcatattctcaacacgcagcgactggagctgcggatccgcagggacggcctg
ccgtttcctgaccgcgacggacttttgcgtctgatgcaccgggatatggaacggtacgag
gggctcggcgactgggtgatatgggtcgccgacactttcaccgaccgccagaccccgggg
gatcaccctctgccggatcttgtagcgcggcatctggcgctggcggaggctgcggcccgg
ggaccgggtggcccggacagcggtgaactctggcagaagaaagccggtcaggaggcgcgc
gccacgatgcagcgcctgacagatcaggcgcgtttcggcagcgatatgtccgccgctgac
tatgccgatctgagcggcgcgctgctggccgaaggtgaagtgcgcgaccgcgacgccccg
catcccggcattatgatctggggcacgctggaggcccgggtgcagggggcggatctggtg
atcctcgcggggctgaacgacggcacatggccggaaacgcccgcgcccgatccctggctt
aaccgtgcgatgcgtcacaaagccgggcttttgctgcctgagcggcgtatcggtcttgcg
gcacatgattatcagcaggcggtgggcgccaccgaggtctggctcacacgcgcgatccgg
tccgatgatgcggaaacggtcgcctcacgctggcttaaccggcttggcaatcttcttgca
ggacttgagggcaatggcggggtaacggcgctggaagcgatgcgtcagcgcggtgcggcg
tggctcgcgcgcgccgacgctctggagaagccgcgtcctgttcccgccgccgcccgaccc
tcgccgagacccccgcgcgccgcccggcccgatgcgctttcagtgaccgagatcaaacgg
ctgatccgcgacccctatgcgatctacgcccgtcacgtgctgggtctgcgcccgctcggc
ccgctggtgcaaagcccggatcacctgatgcgcggcatcgtggtgcacgatattcttgaa
cagtttatcaaagacacgctggtaacgcccgaagcgctgacggctgagcatctttcgcat
gtagcgcaacagatgctgcgggacggtgtgccctggcctgccgagcgcacgctgtggcag
gcgttgctgaaccgcaccgcacccggatttgtcactgctgagattgcacgcagggcacgc
ggcacgcctgccgcgctggaggatgccgcaaccggcaaactggtctggcaggatcccccc
tttaccctcaccgcgcgggctgaccggattgatctcgcgccggatggtgcggcgctgatt
tacgattacaaaaccggcagcgtgccctcgcgcaaacaacaggcgcagtttgacaaacag
ctgctcattgaggccgcgatgatcgaagagggtgtgcttggtctggcggatcctcacccg
gtcagagaagcggtttttatcggattaggctctgatatgaaggaggttgcagcacccctc
gacgatgaacctcctgcggtggtgctggcaaagctgcgcgcgctgatcagagcctatctt
gatcccggacaggggttcaccgcgcgccgcatgatggaaaaagacgcctatggcagcgat
tatgatctgctggcgcgtttcggcgaatgggatgccacggacgcgccggtgccggaggat
ctgaaatga
DBGET
integrated database retrieval system
