Roseobacter ponti: G3256_02415
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Entry
G3256_02415 CDS
T06561
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rpon
Roseobacter ponti
Pathway
rpon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3256_02415 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpon03400
]
G3256_02415 (uvrB)
DNA repair and recombination proteins [BR:
rpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3256_02415 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G3256_02415 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
AAA_7
Kinesin
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QJF50102
UniProt:
A0A858SQH8
LinkDB
All DBs
Position
complement(503713..505917)
Genome browser
AA seq
734 aa
AA seq
DB search
MPYAQTDSSEAPAVMANPAPDVRSRPKLEGGRKFVLKTEFEPAGDQPTAITELSDGLVSG
ERDQVLLGATGTGKTFTMAKVIEKTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVS
YYDYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSV
ETYGAMTQDLKVGSSYDQRQVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIFPAHLEDRA
WRLSFFGEELESITEFDPLTGEKTDTFDQIRVYANSHYVTPKPTMQQAVIGIKKELRIRL
DQLVKDGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPD
HAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVF
VSATPASWEIEQAGGVFTEQIIRPTGLIDPEIEIRPVEMQVDDLLDEVRKVAADGYRTLV
TTLTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLD
IPECGLVAILDADKEGFLRSETSLIQTVGRAARNADGRVIMYADRITGSMERAIGETDRR
RARQLAYNEEHGITPQTVKKNVEDILAGLYKGDVDMNRVTAKVDNPMAGGNLQAVLDGLR
TDMRKAAENLEFEEAARLRDEVKRLEAVDLAIADDPMARQQAVDKAVDDAQKASGRSTMG
RGGMRGGVKRKRRG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcccagaccgattcttcggaagccccggccgtcatggccaaccccgcgcct
gatgtccgcagccggccaaagctggaaggcggccgaaagttcgtgctcaaaacggaattt
gagccggccggcgaccagcccaccgcgatcaccgagctttccgatggcctcgtgtcagga
gaacgcgaccaggttctgctcggcgcgaccggcaccggcaaaacctttaccatggcgaag
gtcatcgaaaaaacccagcgcccggcgatcattctggcgccgaacaagacgcttgcagcc
cagctttacggtgaattcaaagggttctttccggacaatgcggtcgagtacttcgtgtcc
tactacgactattatcagcccgaagcctatgtcgcgcggtccgatacatatatcgagaaa
gagagccagatcaacgaacagatcgaccggatgcgccactccgccacccgtgctctgctt
gaacgcgatgatgtgatcatcgtggcctcggtgtcgtgcatctacggtatcggatcggta
gaaacctacggcgcgatgacccaggatctgaaggtcggctcaagctacgaccagcgccag
gtgatggccgatctggtcgcccagcagtaccgccggaacgatcaggcattccagcgcggc
tcttttcgggtgcgcggcgacagtctcgagatttttcctgctcacctcgaagaccgtgcc
tggcggttgtccttttttggcgaggaactggaaagcatcaccgagttcgacccgctgacc
ggcgaaaagacagacactttcgaccagatccgggtctacgcgaattcgcactatgtcacg
cccaaaccgacgatgcagcaggccgtcatcggcatcaaaaaagagctgcgcatccggctc
gatcagctggtgaaagacggcaaactgcttgaagcgcagcgtctggaacaacgcaccaac
ttcgacctggagatgctggaagcgaccggtgtctgtaacgggatcgaaaactattcgcgc
tatctcacgggccgtgcaccgggagaaccacctcccacgctttttgagttcatccccgac
catgcgattgtttttgcggatgaatctcacgtctcagtgccgcagatcggtggcatgtac
aaaggcgactaccggcgcaaattcacactggcagagcacggcttccgcctgccctcctgc
atggacaaccgccccctcaagtttgaggaatgggatgccatgcgcccgcagtcggtcttt
gtctccgctacccccgcttcctgggaaatcgaacaggcgggtggcgtctttaccgaacag
atcatccggcccaccggcctcattgaccccgaaattgaaatccgtccggtcgagatgcag
gtcgatgatctgctggatgaggtgcgcaaagttgccgctgacggctaccgcacgctggtg
acgacgctcacaaaacgcatggctgaggacctgaccgaatacatgcacgaacagggcatc
cgtgtgcgctatatgcacagcgatatcgacacgatcgagcgcatcgagatcctgcgggat
ctgcgcctcggggcatttgacgttctgatcgggatcaacctgctgcgagaagggctcgac
attcccgaatgtggcctcgtggccattctcgacgcggataaagagggctttctgcgttcg
gaaacctcgctcatccagactgtcggccgtgctgcgcgtaacgccgacggccgcgtgatc
atgtacgccgaccgcataaccggctcgatggaacgggcgatcggagaaacggacagacgc
cgcgccagacagctcgcctataacgaagagcacgggatcacaccgcaaaccgtgaaaaag
aacgtcgaggatattctcgccgggctctacaaaggcgacgtggatatgaaccgcgtgacg
gcaaaggtcgacaatccgatggccggcggcaacctgcaggccgtgctggatggattgcgc
accgacatgcgcaaagctgctgaaaacctcgaattcgaggaagccgcacgcctgcgcgac
gaggtcaagcgtctggaagcggtcgatcttgccattgcggacgatcctatggccagacag
caggcggtcgacaaagccgtcgatgatgcgcaaaaagcctccgggcgcagtacgatgggc
cgggggggtatgcgcggaggcgttaaacgcaaacgacgcggataa
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