Roseobacter ponti: G3256_15040
Help
Entry
G3256_15040 CDS
T06561
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
rpon
Roseobacter ponti
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
G3256_15040 (hrpB)
Enzymes [BR:
rpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G3256_15040 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
HA2_N
AAA_30
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QJF52391
UniProt:
A0A858SY40
LinkDB
All DBs
Position
3163783..3166224
Genome browser
AA seq
813 aa
AA seq
DB search
MPADLPIDVILPDVTRVLSRDRRVVLQAPPGAGKTTRVPLAILTAGITPGRILMLEPRRL
AARAAAERLAQTLGEKVGETVGYRMRGASAVSPATRIEVITEGILTRMIQHQPDLPGVGV
VIFDEFHERSLNADLGLALCLETAAAFRDDLNLVVMSATLDAQPVAGLLGAEILTSEGRS
FDVEQRFLDRPRGKDQRLENATADLVLTALEASPGSALVFLPGEGEIRRTEALLKAHLPA
GVTLHPLYGAMKFADQRAAIRPAETGRKVVLATAIAETSLTIEGIRIVVDAGLSRRSEFD
PASGLSRLITTRVTRAEATQRAGRAGRMAPGVCYRLWPRGEDGALAAFPPAEIEAGDLTG
FALELALWGARAEEMAFVTPPHEGRLREARSVLEMLGALDARGLITGHGRQLSGLPLHPR
LAHMVALGGPDAPLLAALLAGRDILRGGSVDLTRRLLAVKNPRDYEREFGTGPDRGALAR
IRDEAGRLVGKGPARGDQSVGAMAALAYPDRIALRRPGDAPRYILSGGKGAVLPAGDPMA
GVNLLVATDLDGDPREAKIRQAAELSMAELRHLFADQIGWESVCQWSRREGKVLARQQER
FGALVLDDRAWPEAPAAAVATAMLDGVRQLGFTPAGAAERFIARTQLMHRSDPAFPDFSH
EHLTETLEEWLLPHLEGVKTAAGWKRFDPLPALQARLSWEQSQALGRAVPSHFVTPLGRK
VPISYDGAQPQIELRLQEVFGVTRHPLVAGTPVRMTLLSPARRPVQVTEDLPGFWATSYA
DVRKDMRGRYPRHPWPEDPTAADPTLRAKPRGT
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacctgcccatcgatgtgatcctgcctgacgtgacacgcgtgctctcgcgt
gaccgccgggtggtgctgcaggccccgcccggggcgggcaagacaacacgtgtgccgctg
gcaattctgaccgccggcataacaccgggacgcattctgatgctcgagccccgcaggctg
gccgcgcgcgctgccgcagaacgcttggcgcagaccctgggcgaaaaggtcggcgagacc
gtgggataccgcatgcgcggtgcctcagcagtgtccccggccacccggattgaagtgatc
accgagggcattctgacccggatgatccagcatcaaccggacctgcccggcgtcggggtc
gtgatattcgacgaattccacgagagatcgcttaacgccgatctcgggctggcgctctgt
ctggagactgctgcagcctttcgcgacgatctgaacctagtggtcatgtcagcgaccctt
gatgcgcagcctgtcgcaggccttctgggcgcggaaatcctcacctccgaaggtcgcagt
tttgatgtggaacagcggtttctggaccggccgcgcggcaaagatcagcggctggagaac
gccacagctgatctggtccttaccgcgctggaggcctcccccggcagtgcgctggttttt
ctgcccggcgagggagaaatccgccgcactgaggccctgctgaaagcgcatctgccggcc
ggggttacactgcatccgctttacggggcgatgaaatttgcagatcagcgcgcggctatc
cgacctgcagagaccgggcgcaaggttgtgcttgccacggccattgccgagacctctctg
accatcgagggcatccggatcgtggtggacgcaggcctgtcgcgtcggtcggagtttgac
cccgcctccggcttgtctcgcctgatcaccacccgcgtcaccagggccgaggcgacgcag
cgtgccggacgtgcaggccgcatggcgccgggcgtgtgctacaggctctggccccgcggc
gaggatggtgcgctcgcggctttcccgcctgctgagatcgaagcgggcgatcttacgggc
tttgcgctggagctggcgctctggggcgcgcgggccgaagagatggcttttgtgacgccc
ccgcatgagggccgtttgcgtgaggcacgcagcgttctggagatgctgggcgcgctcgat
gcacgcgggctgatcaccggtcacggacggcagctttccggattgccgctgcatccgcgt
cttgcacatatggtggcgctcggtgggccggacgcaccgctgctggcggctttgctggcc
gggcgcgacatcctgcggggcggatctgttgatcttacacgccggcttctggcggtgaaa
aatccccgcgattacgagcgcgagttcggcactggtccggatcgcggagcgctcgcccgg
atccgtgatgaggcaggacggctggtcgggaaaggtcccgcgcggggcgatcagagcgtc
ggcgccatggcggctctggcctatcctgaccgcatcgcgctgcgtcgtccgggcgatgca
ccgcgatatattctgtcgggcggcaagggggcggtcctgcccgccggtgacccgatggca
ggcgtaaatctgctggtggcaaccgatcttgacggcgacccgcgggaggcaaaaatccgg
caggccgcagagctcagcatggcggaactccggcaccttttcgcggatcagatcggctgg
gaaagcgtctgtcagtggtcgcgccgcgaaggcaaagtgctggcccggcaacaggaacgc
ttcggcgcgctggttctcgatgatcgtgcatggcctgaggcgccggcagcggcggtggcc
actgcgatgcttgacggggtgcgccagctcgggttcacgcctgccggtgccgctgagcgg
ttcattgcgcgcacgcagctgatgcaccggtcagacccggcgtttcccgatttctctcac
gaacacctgactgagacgctggaagagtggctgctgccccacctggagggggtaaaaaca
gcagccggctggaaacgctttgatcccctgcccgccctgcaggcacggctgagctgggag
caaagccaggcactgggccgtgctgtgccctcgcattttgtaacaccactggggcgcaaa
gtcccgatcagctatgacggtgcccagccgcagattgaactgcgcctgcaggaggttttt
ggcgttaccaggcacccgcttgttgccgggacgccggtacgcatgacgcttctctcaccc
gcgcgcagaccggtgcaggtcaccgaagacctgcccgggttctgggcgacttcttatgcg
gatgtgcgcaaggatatgcgcgggcgttatcccaggcacccctggcccgaggacccgaca
gcggccgaccccacgctcagggcaaaaccacgcggaacctga
DBGET
integrated database retrieval system
