Rhodopseudomonas palustris TIE-1: Rpal_1292
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Entry
Rpal_1292 CDS
T00722
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rpal_1292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpt03400
]
Rpal_1292
Enzymes [BR:
rpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpal_1292
DNA repair and recombination proteins [BR:
rpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rpal_1292
RecFOR pathway proteins
Rpal_1292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
nSTAND3
AAA_2
Rad17
AAA_18
AAA_14
AAA_17
NTPase_1
AAA_33
RNA_helicase
TsaE
AAA_28
NB-ARC
NACHT
AAA_24
AAA_7
IstB_IS21
ABC_tran
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ACE99831
UniProt:
B3QHS4
LinkDB
All DBs
Position
1362042..1363091
Genome browser
AA seq
349 aa
AA seq
DB search
MTDPSRLVTPERRGDDLGDAALRPQNLSEFVGQQQARANLQVFIDAARKRKEALDHVLFV
GPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPS
VEEVLYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVGATTRAGLLTNPLRDRFGIPIRL
NFYTIEELESIVTRGARVLGTPITADGANEIARRARGTPRIAGRLLRRVRDFASAADAEA
IDRSIADHALGALEVDSAGLDAMDRRYLTTIALNYGGGPVGVETMAAALSEPRDAIEDII
EPYLIQCGYLQRTPRGRLLTDHAFRHLGLAAPSRDPAQFGLFGDTGDQE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccctcccgtctcgtcacacccgagcgccgcggtgatgacctcggcgatgcg
gcgctgcggccgcaaaatctgtccgagttcgtcggccagcagcaggcgcgcgccaacttg
caggtgttcatcgacgccgcgcgcaagcgcaaagaggcgctcgatcacgtgctgttcgta
ggtcctccgggcctcggcaagaccaccctggcgcagatcgtggcgcgcgagctcggcgtc
gggtttcgcgccacgtcgggaccagtgatcgccaaggccggcgatctcgctgccttgctg
accaatctcgaagaacgcgatgtgttgttcatcgacgagattcaccgcctcagcccgtcg
gtcgaggaggtgctgtatccggcgatggaggactttcagctcgacctgatcatcggcgaa
ggcccggcagcccgctcggtgaagatcgatctgtcgaagttcacccttgttggcgccacc
acgcgcgccggcctgctgaccaatccgctccgcgaccgcttcggcattccgatccggttg
aatttctacacgatcgaggagctggagagcatcgtcacccgcggcgcgcgcgtgctcggc
accccgatcaccgccgatggcgccaacgagattgcccgccgcgcccgcggcacgccgcgc
atcgccggccgcctgctgcgccgggtccgcgacttcgcgtccgcggccgacgccgaagcg
atcgaccgcagcatcgccgaccatgcgcttggcgcgctggaagtcgatagcgcgggcctc
gatgccatggatcggcgttacctcaccacgatcgcgctcaactatggcggcggcccggtc
ggcgtcgagacgatggcggcggctttgtccgagccgcgcgacgccatcgaggacatcatc
gaaccgtatctgatccaatgcggctatctgcaacgcaccccgcgcgggcgcctgctcacc
gaccacgccttccgccacctcggcctcgccgccccctcgcgcgacccggcgcagttcggg
ttgtttggcgatacaggggaccaagagtag
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