Rhodopseudomonas palustris TIE-1: Rpal_4908
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Entry
Rpal_4908 CDS
T00722
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00061
Fatty acid biosynthesis
rpt00071
Fatty acid degradation
rpt01100
Metabolic pathways
rpt01212
Fatty acid metabolism
rpt02024
Quorum sensing
Module
rpt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpal_4908
00071 Fatty acid degradation
Rpal_4908
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpal_4908
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpt01004
]
Rpal_4908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpt04147
]
Rpal_4908
Enzymes [BR:
rpt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpal_4908
Lipid biosynthesis proteins [BR:
rpt01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Rpal_4908
Exosome [BR:
rpt04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpal_4908
Exosomal proteins of breast cancer cells
Rpal_4908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACF03397
UniProt:
B3Q8X6
LinkDB
All DBs
Position
complement(5278446..5279984)
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AA seq
512 aa
AA seq
DB search
MPDFITLPALVRDTAQARPDRIAVIDGERQLRYAEFDALIDRIAATLQRDGLKPTDTISI
CALSSIEYAATFLAALRAGIAVAPLAPSSTAKDFSAMVRDSAAKILFTDDFAANAMKDAE
IDAAVKRVAFDDGTSGEAFTRWLAPEGTKPAPVTIDPEWVFNIIYSSGTTGTPKGIVHSH
QMRWAQYGKLDPIGYGPDAVTLLSTPLYSNTTLVCFNPTLAGGGTVVLMKKFDARGFLEL
AQKYRVTHAMLVPVQYRRIMALPEFGQFDLSSFQMKFCTSAPFAPELKADILKRWPGGLT
EYYGMTEGGGSCTLLAHEFPNKLHTVGQPRPGHEIRMIDEDGNFLPNGEVGEIVGRSDTI
MKGYLNQPQKTAEVFWTDKDGNLWVRSGDVGRFDADGFITLMDRKKDMIISGGFNIYPSD
IEAVAAKHPDVLEVAVVGMPSEEWGETPVAFVAARPGRSIDPAELKTWTNGQVGKTQRLA
EVVLVESLPRSAIGKVLKRELRDQRLGMKAAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacttcatcactcttcccgccctggtccgcgacaccgcgcaggcgcggccggac
cggatcgcggtgatcgacggggaacggcaattgcgctacgcggaatttgatgcgctgatc
gatcgcatcgccgcgactttgcagcgcgatggtctgaaaccgaccgacaccatctcgatc
tgtgcgctgtcctcgatcgaatatgcggcgactttccttgccgcactgcgcgccggcatc
gcggtcgcgccgctggcgccgtcgtcgaccgccaaggacttctccgcgatggtgcgggac
tccgcggccaagattctgttcaccgacgacttcgccgccaatgcgatgaaggacgccgag
atcgatgccgctgtgaagcgcgtggcgttcgacgacggcacgagcggcgaagcgttcacg
cgctggctggcgccggaaggtaccaagccagcgccggtgacgatcgatccggaatgggtg
ttcaacatcatctactcgtccggcacgaccggcacgccgaagggcatcgttcacagccat
cagatgcgctgggcgcaatacggcaagctcgacccgatcggctatggccccgacgcggtg
acgctgctgtcgacgccgctctattccaacacgacgctggtctgcttcaatccgacgctc
gctggcggcggcactgtggtgctgatgaagaagttcgatgcccgcggtttcctggagctg
gcgcagaagtatcgcgtcactcatgcgatgctggtgccggtgcagtatcgccggatcatg
gcgctgccggagttcggtcagttcgacctgtcgtccttccagatgaagttctgcacctcg
gctccgttcgcgccggagctgaaggccgatatcctgaagcgctggcccggcggtctgacc
gagtactacggcatgaccgagggcggcggctcgtgcacgctgctggctcacgaattcccg
aacaagctgcacaccgtcggccagccgcggcccggtcatgaaatccggatgatcgacgag
gacggcaacttcctgccgaacggtgaggtcggcgaaatcgtcggccgctccgacaccatc
atgaagggctacctcaatcagccgcagaagaccgctgaagtgttctggaccgataaggac
ggcaacctctgggtgcgcagcggcgatgtcggccggttcgatgccgacggcttcatcacc
ctgatggaccgcaagaaggacatgatcatctcgggcggcttcaacatctacccgagcgat
atcgaggctgtagccgccaagcaccccgacgtgctcgaggtcgcggtcgtcggcatgccg
tcggaagagtggggcgagaccccggtggcgttcgtcgccgcgcgccccggccgcagcatc
gatccggccgaactgaaaacctggacaaacggccaggtcggcaagacccagcgtctcgcc
gaggtggtgctggtcgagtcgctgccgcgcagcgccatcggcaaggtgctgaagcgcgaa
cttcgcgaccagcgtctcggcatgaaggcggcgtcgtaa
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