Rhodopseudomonas palustris DX-1: Rpdx1_1359
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Entry
Rpdx1_1359 CDS
T01381
Name
(GenBank) Polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rpdx1_1359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpx03019
]
Rpdx1_1359
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Rpdx1_1359
Messenger RNA biogenesis [BR:
rpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rpdx1_1359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADU42982
UniProt:
E6VGE6
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All DBs
Position
1441290..1442546
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AA seq
418 aa
AA seq
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MTDVPVRSDAPWLHTGPAARVLALLNGDGEEARVVGGAVRNALFGLPIGDVDIATTALPD
EVVRRAKAAGIKAVPTGIEHGTVTLVLEGHGFEITTLREDVETFGRKAKVAFGRDWARDA
QRRDFTINALSMSADGTVHDYVGGLADIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAY
GAGSPDRDAYLACIRGRDGLSTLSAERLRMEMLKLMVAGGAEASVVAMADGGLLLAVLGG
VAYLGAFAAMIGAERALGLEADPVRRLGALAVAVTEDAKRLAQRLRLSNAEAKRLDSMGH
RWWRLAGMDEATARRRLYRLGEARFHDRMMLAWARAGRGADPAPWHALIALPERWQAPAF
PLKAADFLARGFAAGPALGHVLTLAEDAWLAADFPLEPAALRTIADQTAARFARDHLL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtgccggtgcgcagcgatgcgccgtggctgcatacgggaccggcggcgcgg
gtactggcgctgctgaacggggacggcgaagaggcgcgggtggtcggcggtgcggtccgc
aacgctctgttcgggctgccgatcggcgatgtcgacattgccaccaccgcactgccggac
gaggtggtccggcgcgccaaggccgccggcatcaaggcggtgcccaccggaatcgagcac
ggcacggtgacgctggtgctcgagggccacggcttcgaaatcactacgctccgcgaggac
gtcgagacgttcggccgcaaggccaaagtggcattcggccgcgactgggcgcgcgatgcg
cagcgtcgcgacttcaccatcaacgccctgtcgatgtcagccgacggcacggtgcacgac
tacgtcggcggtctcgccgatatcgcggcgcggcgggtgcggttcatcggcgatccggat
cagcgcatcgccgaagattacttgcgcatcctgcggttcttccgcatccacgccgcctac
ggcgccggatcgccggatcgcgatgcttatctggcctgcatccgcggccgcgacggtctt
tcgacgttgtccgccgagcggctgcggatggagatgctgaagctgatggtcgcgggcggc
gccgaggcctcggtggtggcgatggccgacggcgggctactgctcgcggtgctcggcggc
gtcgcttatctcggcgctttcgccgcgatgatcggcgccgaacgcgcgctcgggctcgag
gccgatccggtccggcggctcggcgcgctggcggtcgcggtgacggaagacgccaaacgg
ctggcgcagcggctgcggctctccaacgccgaagccaagcggctcgactcgatggggcat
cgctggtggcggctcgccggcatggacgaggccaccgcgcggcggcggctgtatcggctc
ggcgaagcccggttccacgaccgcatgatgctggcctgggcgcgcgccgggcgtggcgcc
gatccggctccctggcacgctctgatcgcgctgccggagcgctggcaggcgccggcattc
ccgctcaaggccgcggacttcctcgcgcgcggcttcgccgccggaccggcgctcggtcat
gtgctgacgctggccgaagatgcctggctcgccgccgattttccgctcgagccggccgca
ctacgcaccatcgccgaccagaccgcggcgcggttcgcccgcgatcacctgctttga
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