Rhodopseudomonas palustris DX-1: Rpdx1_1387
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Entry
Rpdx1_1387 CDS
T01381
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpdx1_1387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpx02000
]
Rpdx1_1387
Transporters [BR:
rpx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rpdx1_1387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADU43010
UniProt:
E6VGH4
LinkDB
All DBs
Position
1470599..1472209
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AA seq
536 aa
AA seq
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MSHPPRWMHSVVASKFALPALALAASLTLPAAVDAKTIRAVMHSDLRIIDPGLTTAYITR
DHGYMVYDTLLAMDSNFKVQPQMAEYKVSDDKLTYTFTLRDGLKWHDGAPVTAEDCVTSL
QRWGKKDGMGQKLMQFTASLEAPDAKTIVLKLKEPYALVLESIAKPSSIVPFMMPKRIAE
TPADKAIPEQIGSGPFKFVASEFQPGVKAVYVKNADYVPRKEAPSWTSGGKVVKVDRVEW
ITMPDAQTAVNALQSGDIDFVENPSFDILPVLQQDKELKIETLNKLGYVTIGRMNFLYPP
FDNPKVRRAALLAMNQKPILDALVGNPDYYQICGAIFGCGTPLATDVDSAPVTKGDDMAE
AKKALAESGYDGTPVVLMAPGDVVTLKAQPIVAAQLLREAGFKVDLQATDWQTVVSRRAS
QKPPAEGGWNIFFTNWVVPDVMNPVANVMLNGKGKTGGWFGWPQDDKMEALLDKFVRATS
PEDQKAIATDLQKRVYEEVTYLHVGQYKTPTVWRTELTGVLDGPATPVFWNMDKKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatccaccgcgttggatgcactcggtcgtcgcgtcgaaattcgccttgccggcg
ctcgcgctcgccgcatcgctgacgctgccggctgccgtcgatgccaagacgatccgggcc
gtcatgcattccgatctgcgtatcatcgaccccggcctgaccaccgcgtacatcacccgc
gatcacggctacatggtgtacgatacgctgctggcgatggattcgaacttcaaggtccag
ccgcagatggccgagtacaaggtctcggacgacaagctgacctataccttcacgttgcgc
gacgggctgaagtggcacgacggcgcgccggtcaccgcggaggattgcgtcacctcgctg
cagcgctggggcaagaaggacggcatgggccagaagctgatgcagttcaccgccagcctc
gaggcgcccgacgccaagaccatcgtgctgaagctgaaggagccatacgcgctggtgctg
gagtcgatcgccaagccgtcgtcgatcgtgccgttcatgatgccgaagcggattgccgag
accccggccgacaaggcgatccccgagcagatcggctccggtccgttcaagttcgtcgcg
tctgaattccagcccggcgtcaaggcggtatacgtcaagaacgccgactacgtgccgcgc
aaggaagcgccgagctggacctcgggcggcaaggtggtgaaggtcgaccgcgtcgaatgg
atcaccatgccggacgcgcagaccgcggtgaacgcgttgcaatcgggcgacatcgacttc
gtcgagaacccgtccttcgacatcctgccggtgctgcagcaggacaaggaactgaagatc
gagaccctcaacaagctcggctacgtcaccatcggccggatgaacttcctgtatccgccg
ttcgacaatccgaaggtgcggcgcgcggcgctgctggcgatgaaccagaagccgatcctc
gacgcgctggtcggcaatcccgattactaccagatctgcggtgcgatcttcggctgcggc
actccgctcgccaccgacgtcgactcggcgccggtcaccaagggcgacgacatggcggag
gccaagaaggcgctcgccgaatccggctacgacggcacgccggtggtgctgatggcgccg
ggcgacgtcgtcaccctgaaggcgcagccgatcgtcgccgcgcagctcctgcgcgaggcc
ggcttcaaggtcgacctgcaagcgaccgactggcagaccgtggtgtcgcgccgcgccagc
cagaagccgccggccgaaggcggttggaatatcttcttcaccaactgggtggtgccggac
gtgatgaacccggtcgccaacgtcatgctcaacggcaagggcaagaccggcggctggttc
ggctggccgcaggatgacaagatggaagcgctgctcgacaagttcgtccgggcgacgtcg
cctgaggatcagaaggcgatcgcgaccgatctccagaagcgggtctatgaggaagtgacc
tatctgcacgtcggccagtacaagaccccgacggtgtggcgcaccgaactgaccggcgtg
ctcgatggtcccgcgaccccggtgttctggaatatggacaagaaggagtaa
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