KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_2777
Entry
Rpdx1_2777        CDS       T01381                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx00740  Riboflavin metabolism
rpx01100  Metabolic pathways
rpx01110  Biosynthesis of secondary metabolites
rpx01240  Biosynthesis of cofactors
rpx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Rpdx1_2777
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpdx1_2777
Enzymes [BR:rpx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Rpdx1_2777
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Rpdx1_2777
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF3335
Other DBs
NCBI-ProteinID: ADU44360
UniProt: E6VJB4
LinkDB
Position
complement(2968246..2969415)
AA seq 389 aa
MIFRILEEQIGHKLAAEKAAKAAGYADQRFMQLALALGRRGQGRTGTNPAVGAVLVKDGV
IVGRGWTQDGGRPHAEVEALRRAGEAARGATLYVTLEPCSHHGRSPPCADAIVAAGIARV
VSAIEDPNPLVAGQGHAKLRAAGIAVEIGICADEATHDHAGHLCRISARRPHVTLKLAVS
ADGKIAAAGHKQVAITGEAANARTHLLRARSDAVLVGIGTVLADDPELTCRLPGMAAQSP
IRVVLDRSLRIPSASKLVHSARTTSLWLMASEIADAATAARLGAAGAEVVHVADCAAAPG
LDLPAVLHALSDKGVTRLLVEGGARVAAAFVTQRRADEIRLWRSETTIGPDGVDALAGLP
LAAITDSPHWRVRSSERVGSDTLTIYDPN
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgatcttccgcatcctggaggagcagatcggccacaagctcgccgccgagaaggcggcc
aaagccgcaggttacgccgaccagcgtttcatgcaattggcgctggcgctgggccggcgc
gggcaggggcgcaccggaaccaatccggccgtcggcgcggtgctggtcaaggacggcgtc
attgtcggccgcggctggacccaggacggcggccgcccccatgccgaggtcgaggcgctg
cgccgcgccggcgaggcggcgcgcggtgccacgctttatgtcacgctggaaccctgctcg
catcacggccgctcgccgccctgcgccgatgcgatcgttgccgccggcattgctcgggtg
gtgtcggcgatcgaagaccccaatccgctggtcgcgggccagggccacgcgaagctgcgc
gccgccggaatcgcggtcgagatcggcatctgcgccgatgaggcgacccacgaccatgcc
ggccacctttgccggatcagcgcccgccgtccgcatgtgacgctgaagctggcggtttcg
gccgacggcaagatcgccgccgcgggccacaagcaggtcgcgatcaccggcgaggcggcg
aacgcccggacgcatctgctgcgcgcccggtcggatgcggtgctggtcggcatcggcacc
gtgctggccgacgatccggagctgacctgccggctgcccgggatggcggcgcagtcgccg
atccgtgtcgtgctcgaccgatccttgcggattccgtcggccagcaagctggtgcattcg
gcccggaccacgtcgctgtggctgatggcctccgaaatcgccgacgccgccaccgccgcg
cgacttggtgccgccggtgccgaggtggtccatgtggccgattgcgccgccgcgccgggg
ctggatctgccggcggtgctgcacgcgctgtcggacaagggcgtcacccggctgctggtc
gaaggcggcgcccgcgtcgccgcggcgttcgtcacgcagcggcgcgccgacgaaatccgg
ctgtggcgcagcgagacgacgatcgggcccgacggggtcgacgcgctggcggggctgccg
ctcgccgcgatcaccgattcaccgcattggcgcgttcgcagcagcgagcgcgtcggctcc
gacacactcaccatttatgatcccaactag

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