Rhodopseudomonas palustris DX-1: Rpdx1_2880
Help
Entry
Rpdx1_2880 CDS
T01381
Name
(GenBank) TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpx03016
]
Rpdx1_2880
Transfer RNA biogenesis [BR:
rpx03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Rpdx1_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
PEP_mutase
FMN_dh
NanE
IMPDH
Motif
Other DBs
NCBI-ProteinID:
ADU44463
UniProt:
E6VK93
LinkDB
All DBs
Position
complement(3072227..3073261)
Genome browser
AA seq
344 aa
AA seq
DB search
MTGPTVSGSPPLRIGNIAVARPVLLAPMTGITDAPFRRQVAELGAGLVVSEMTASEDLVA
GRRMSVRRCDKVGQGPHVVQLAGCEARWMAEGARIAEAGGADIIDINMGCPARHVTGGLS
GSALMRDLDHALTLIEATIGAVRVPVTLKMRLGWDDRSRNAPELARRAQDAGVQLVTVHG
RTRQQFYKGEADWGAVRAVRDAISIPLVVNGDITCHDTALEALQRSGADAVMIGRGAQGR
PWLPGQVGRQLTTGQAGAEPPLAAQRDYLRTLYDDILALYGVRIGLRHARKHLGWSLEVA
AASAGAPPAIVKHWRAAILTEENPARVHRALADAYDDFAWRAAA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgactggacccactgtatcaggttcgccgcctttgaggattggcaatattgcggtggcc
cgtccggtacttctggcgccgatgacaggcattaccgacgcgccgttccggcggcaagtc
gcggaactcggcgctggactggtggtctcggagatgaccgccagcgaggatctggtcgcc
ggtcgacggatgtcggtacgccgctgtgacaaggtcggccagggaccgcacgtcgtccag
cttgccggctgcgaggcacggtggatggcggagggggcccggattgcggaagccggcggc
gcggacatcatcgacatcaatatgggctgcccggcgcggcacgtcaccggcgggttgtca
ggctcggccctgatgcgggatctcgatcacgcgctgacgctgatcgaagcgacgatcggc
gcggtgcgggtgccggtgacactgaagatgcggctcggctgggatgatcgctcgcgcaac
gcgccggagctggcgcggcgtgcgcaggacgccggagtgcagctcgtcacggtgcatggc
cgcacccggcagcagttctacaagggcgaagccgattggggcgcggtgcgcgccgtccgg
gacgcgatctcgattccgctggtggtcaacggcgatatcacctgtcacgacaccgcgctt
gaagcgctgcagcggtcgggcgccgacgcggtgatgatcgggcgcggcgcccaggggcgg
ccgtggctgccggggcaggtcggccgccagctcaccaccggtcaggccggggcggagccg
ccgctcgcggcgcagcgcgattacttgcgtacgctctacgacgacattctggcgctgtac
ggcgtcaggatcggactgcgtcacgcgcgcaagcatctcggctggtcgctcgaggtcgcc
gccgccagcgccggtgccccgccggcgattgtgaaacattggcgcgctgcgatcctgacc
gaagagaatccggcccgcgtgcatcgcgcgctcgccgacgcctacgatgatttcgcctgg
agggccgccgcatga
DBGET
integrated database retrieval system
