Rhodococcus pyridinivorans SB3094: Y013_00820
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Entry
Y013_00820 CDS
T02974
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
rpy
Rhodococcus pyridinivorans SB3094
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AHD19336
UniProt:
V9X7D4
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Position
complement(173599..175137)
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AA seq
512 aa
AA seq
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MLLHSVVDTSVAVAATRSRRTKIDLLRELLGRAEPHEVEAVVSWLSGEMTQGRLGVGFRT
LAGLSAPVADDPVLDVDEVSGFLDRLAGISGSGSTAARQQLLLDLFGRATEAEQRFLVAL
LGGELRQGALEGVMTDAVAAAAGLPVEPVRRAVMLSGRLAQAAAAVFEGGVDALAEFGLE
LGRPVRPMLASPAESLEAALIEFDGAVSVEYKLDGARIQVHRHEDAVWIFTRTLRDITAS
VPELVELVRALPCRSVVLDGETLALTDAGRPRPFQETMSRFGARSERELLLHPYFFDCLH
LDGADLLDEPLSVRRDHLARVAGEHRIPTLVAPDADSAEAHLGDSLGNGHEGVMVKSLTS
TYTAGRRGRAWQKVKPEHTLDLVVLAAEWGYGRRTGFLSNLHLGARDPDGGPPIMVGKTF
KGLTDALLQWQTEEFPHHETHRDEHTVHLRPAIVVEIELDGVQTSSRYPGGVALRFARVL
RYRPDKSAADADTIDAVRALLPAAPVPGSGLP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcactcggttgtcgacacctccgtcgccgtcgccgccacacggtcacgacgc
accaagatcgatctgctgcgggaattactcgggcgcgccgaacctcacgaggtcgaagcg
gtggtctcatggttgtccggagagatgacccagggtcgcctgggtgtcggtttccgcacc
ctcgccggcctctccgcaccggtcgccgacgatcccgtgctcgacgtcgacgaggtgtcc
ggcttcctcgaccgcctcgccggcatctccggttccggatccaccgccgcgcggcagcaa
ctgctcctggatctgttcggacgggccaccgaggccgagcagcgtttcctcgtcgcgctc
ctcggcggtgagctgcggcagggcgcgctcgaaggggtgatgaccgatgcggtcgcagcg
gcagccggtctccccgtcgaaccggtccgtcgggcggtgatgttgtcgggccgactcgcg
caggccgcagcggcggtcttcgagggtggtgtcgacgcgctggcggagttcggcctggag
ctcggccgaccggtccggccgatgctcgcctcacccgccgagtcgctcgaggcggcactc
atcgagttcgacggggcggtgagcgtggagtacaaactcgacggtgcacgcatccaggtg
caccgccacgaggacgcggtgtggatcttcacccgcacgctgcgcgacatcaccgcatcg
gtccccgaactggtcgaactcgtccgggcgctgccgtgccgcagtgtcgtgctcgacggc
gagacactcgcgctcaccgatgccggccgtccccgaccgttccaggagaccatgagccgg
ttcggtgcccgctccgaacgcgaactgcttctccacccgtacttcttcgactgcctgcac
ctcgacggcgccgacctgctcgacgagccgctgtcggtgcgtcgcgaccatctcgcccgc
gtcgcgggtgagcaccgcatccccacgctcgtcgctccggacgccgacagcgccgaggcg
cacctcggtgactcgctcggcaacggtcacgagggcgtcatggtgaagtcgctcacatcg
acctacaccgccggccgccggggccgagcctggcagaaggtcaaacccgagcacaccctg
gatctcgtggtgctcgccgccgaatggggttacgggcgccgcaccggcttcctgtccaac
ctgcacctcggtgcccgcgaccccgacggtggtccgccgatcatggtcgggaagacgttc
aagggactcaccgacgcgctgctgcagtggcagacagaggaattcccacaccacgagaca
caccgcgacgagcacaccgtccacctgcgacccgcgatcgtcgtcgagatcgaactcgac
ggagtgcagacgagcagccgctatccgggcggggtggcgctgcgcttcgcacgggtgctg
cggtaccggcccgacaagtcggccgccgacgccgacaccatcgatgcggtccgcgcgctg
ctgcccgcggcaccggttcccggaagcggcctaccgtag
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