Rubrobacter radiotolerans: RradSPS_0417
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Entry
RradSPS_0417 CDS
T03080
Name
(GenBank) oxoglutarate dehydrogenase (succinyl-transferring), E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00020
Citrate cycle (TCA cycle)
rrd00785
Lipoic acid metabolism
rrd01100
Metabolic pathways
rrd01110
Biosynthesis of secondary metabolites
rrd01120
Microbial metabolism in diverse environments
rrd01200
Carbon metabolism
rrd01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RradSPS_0417
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RradSPS_0417
Enzymes [BR:
rrd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RradSPS_0417
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
PFOR_II
DUF6378
Motif
Other DBs
NCBI-ProteinID:
AHY45700
UniProt:
A0A023X113
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All DBs
Position
444289..447285
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AA seq
998 aa
AA seq
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MQSRTGDLQAEFQGPNLGYVLGLYESFKEDPESVDEETRRFFENWRPPEMNGAGTAPAGV
SNGTSVSGVDVDKVIGAAKYIRSIRDFGHSAAQLDPLGSEPPGDPALDAEWHGITDEDLE
KMPSSVVGGPITDRTENALEAVRELRRLYCGRTGYDFGHIAHLPQERFWLRDAVESERFS
TPMNETMARWVLKRLTRVETFERFLHRTFLGQKRFSVEGNDIVVPMLDRLMRLASEAGTP
EVVMGMAHRGRLNVLAHVLNKPYAKIFSEFQQPDRSEGKSMGGGSGEAWVGDVKYHLGIR
NYHLKDEEATSQVLINLAPNPSHLEHVNPVALGMTRAAQEKRDKVGPPEQDFKAAFNVIL
HGDAAFIGEGVCAESLNLSRLPGYTTGGAIHIITNNQLGFTTEARDARSTTYASDLAKGY
EIPVVHVNADDPEACMAAISMAFAYRERFHKDFMIDLIGYRRFGHNEGDEPAYTQPQMYE
IIRNHPTVRELWAKTLEERGLIEPGEADRLVEEVYQRMTDIHKGEASDMETEEEVITDVP
HTPLVEIPDTAVPAERLEKLNAALLERPEGFTPNSKLERMMQKNRGDLSQIDWAHAEALA
FGSLIEEGTAVRLTGQDSQRGTFSHRHAVLHDEKTGEEYVPLQHVPDGKASFAVYNSPLS
EIAVMGFEYGYSMNSSDSLLLWEAQYGDFANVGQPMIDQFIASGQAKWGQASELVMLLPH
GYEGNGPEHSSARLERFLQLAAHENLRIANLTTAAQYFHILRAQAKLVDYQRPLIIMAPK
SLLRHPMSASSLEDLSEGAFQLVLDDTKARERAEKVTRLILCSGKFYTELEGAEAREEAE
NVAIGRIELLYPFPEERVRELIGGYPNLEEVIWAQEEPKNMGAWFFMEPRLREILDGVPV
LYVGKPARPSPAQGSGRFHKQEHARIVSEALFGELGDSQYFRPEVEPSFSDGMDSKGEEG
SPDSIPEGKADEDSKGEGENGSNGQVERKKGKKSGVSS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagaacgggagaccttcaagcggagtttcagggaccgaacctcggatacgtg
ctcggcctctacgagagcttcaaagaggaccctgagtcggtagacgaagagacgagacgt
ttcttcgagaactggagacctccggagatgaacggggcggggaccgccccggcgggcgtc
tcgaacgggacgagcgtctcgggcgtggacgtggacaaggttataggggccgcaaagtac
atccgctcgataagggacttcgggcactcggcggcgcagctcgaccccctggggagcgag
ccccccggcgacccggcgctcgacgccgagtggcacgggatcacggacgaggacctcgaa
aagatgccttcgagcgtcgtcggcggcccgataaccgaccggacggagaacgcccttgag
gcggtccgggagcttcgcaggctctactgcggcaggacgggctacgacttcgggcacatc
gcgcacctcccgcaggagcggttctggctcagggacgcggtcgagagcgagcgtttcagc
acccccatgaacgagacgatggcccggtgggttctcaagcgcctgacgcgcgtcgagacc
ttcgagcgtttccttcaccggacctttctcgggcagaagcgcttcagcgtcgaggggaac
gacatcgtcgtgccgatgctcgaccggctgatgcgtctggcgagcgaggccgggaccccc
gaggtcgtcatggggatggcgcaccggggccggctgaacgtgctggcccacgtcctgaac
aagccgtacgcaaagatcttcagcgagttccagcagccggaccgctcggagggcaagtcc
atgggcggcggctcgggcgaggcgtgggtcggggacgtgaagtaccacctcgggataagg
aactaccacctcaaggacgaggaggcgacctcgcaggtccttataaaccttgcgccgaac
ccgtctcacctggagcacgtcaacccggtcgcgctcgggatgacgcgcgccgcgcaggag
aagcgcgacaaggtcgggcctcccgagcaggacttcaaggcggcctttaacgtgatcctc
cacggcgacgcggcgtttatcggggagggggtgtgcgcggagtctttgaacctctcgcgc
ctgcccggatacacgaccggcggggcgatccacatcatcacgaacaaccagctcggcttc
acgaccgaggcccgggacgcccgctcgacaacgtacgcgagcgatctggcgaaggggtac
gagatcccggtcgtccacgtcaacgccgacgacccggaggcgtgcatggcggccatcagc
atggccttcgcctaccgggagcggttccacaaggacttcatgatcgaccttatcggctac
cggaggttcggtcacaacgagggcgacgagccggcctacacgcagccgcagatgtacgag
atcatcagaaaccacccgacggtgcgcgagctttgggcaaagacccttgaggagcggggc
ctcatagagcccggcgaggccgaccggctcgtcgaggaggtctaccagcggatgaccgac
atccacaagggcgaagcctcggacatggagaccgaggaggaggtcataaccgacgtcccg
cacacgccgctcgtggagataccggacacggccgtcccggccgagcggctcgaaaagctg
aacgccgcgcttcttgagcggccggagggcttcacgccgaactccaagctggagcggatg
atgcagaagaaccggggcgacctctcgcagatagactgggcacacgccgaggcgctggcg
ttcggctcgcttatcgaggagggtacggcggttcgcctgacgggtcaggactcgcagcgc
gggaccttcagccaccgccacgcggtcctgcacgacgagaagacgggcgaggagtacgtg
ccgctgcagcacgtcccggacggcaaggcgtcgtttgcggtgtacaacagcccgctgtcg
gagatcgcggtgatgggcttcgagtacggctactcgatgaactcaagcgattcgctgctt
ctgtgggaggcccagtacggcgacttcgcgaacgtcggccagccgatgatcgaccagttc
atagcgagcgggcaggcgaagtggggtcaggcgtcggagctcgtgatgctgctgccgcac
ggctacgaggggaacggacccgagcactcctcggcgcgcctggagcgcttcctgcagctc
gctgcgcacgagaacctgcgcatcgcgaacctgacgacggcggcgcagtacttccacatc
ctgcgcgctcaggcgaagctcgtcgactaccagcggccgctcatcatcatggccccgaag
agcctgctccgccacccgatgagcgcctcgtcgctcgaagacctctcggagggcgccttc
cagctcgtcctcgacgacacgaaggcacgggagcgggcggagaaggttacgcgcctgatc
ctctgctccgggaagttctacacggagcttgagggagctgaggcgcgcgaggaggcggag
aacgtcgccatcgggcggatcgagcttctgtacccgttcccggaggagcgggtgcgggag
ctgatcgggggctacccgaacctcgaagaggtgatctgggcccaggaggagccgaagaac
atgggtgcgtggttctttatggagccgcgcctcagggagatcctcgacggcgttccggtc
ctctacgtcggcaagcccgcgcgtccgtccccggcgcagggctccgggcgcttccacaag
caggagcacgcaaggatcgtctccgaggcgctcttcggggagctcggcgactcgcagtac
ttccggcccgaggtcgagccgtccttttcggacggcatggactccaagggcgaggagggc
tcgccggactccatccccgaggggaaggccgatgaggacagcaagggcgagggcgagaac
ggctcgaacggtcaggtggagcggaagaagggcaagaagtccggcgtctcctcctga
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