Rubrobacter radiotolerans: RradSPS_1788
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Entry
RradSPS_1788 CDS
T03080
Name
(GenBank) uvrC: excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RradSPS_1788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_1788
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RradSPS_1788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AHY47071
UniProt:
A0A023X4H2
LinkDB
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Position
complement(1873869..1875689)
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AA seq
606 aa
AA seq
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MPDRSYPDRSHLPTSPGVYIFRDSDEVVIYVGKAKNLRSRVANYFTKSGDGRPKIAELRE
RVEDIDFISTKSETEALVLEANLIKRYRPRFNASLRDDKSYPYIVVTTGDEYPRVFASRG
NRDPRHRYFGPFPSAGSVHATLDVLNKTFPFRKCRGPEPGRRSGVPCLNYHIGRSAAPCI
GAVTKEEYDGIVREVIAFLEGRVDGLIRDRETRMKEAAREMDFERAAKLRDELSALRTVR
ERQQATIASEESFDAFGAYVEGETACVQVFAVRDGQVTGRDSFLLDNYGEADADSVALQF
IPQFYDATRVPREVLVASADEEALAPISEHLSELRGTRVDVRRPQRGDKRRILELAQRNA
EMSLEHERTLEEARRNQVASTLDDLMEELALPRLPLRIECYDISNTMGTNSVASMVVFQG
GRPAKSEYRRFRIKTVEGADDFASMAEVIRRRLERLNEGDEKFLPAPDLILLDGGKGQLS
AVVPVMEELDPDADIPLRSLAKRDEWVFEPGKPDPVVLERNSPHLRLLQRVRDEAHRFAN
TYHKKLRGKAMTASVLDELPGVGPARKKRILDHFGTPDAFMNASVEELEEVLPGRVARQV
HARIHR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccgcagctatcccgaccgctcgcacctcccgacctcgccgggtgtttacatc
ttccgcgactcggacgaggtcgtgatctacgtcgggaaggcgaagaacctccggagccgg
gtcgcaaactacttcacgaagtccggtgacgggcggccgaagatagccgagcttcgcgaa
cgggtcgaggacatcgactttatctctacaaagagcgagacggaggcgctcgtcctcgaa
gcgaacctcattaagcgctaccggccgcgtttcaacgcttcccttcgcgacgacaagtcc
tacccctacatcgtcgttacgacgggcgacgagtacccgcgggtcttcgcctcccggggc
aaccgcgacccgcgacaccgctacttcgggccgttcccgtcggccgggtcggttcacgcg
acgctcgacgtgctcaacaagaccttccccttccgcaagtgccgcggcccggagccggga
cgacgttccggggtgccgtgcctgaactaccacatcggtcgctcggccgcgccgtgcatc
ggggcggtaacaaaggaagagtacgacggcatcgttcgggaggtgatcgcgttcctcgaa
gggcgggtcgatggcctgatccgggaccgcgagacgcgcatgaaggaggccgcccgggag
atggacttcgagcgggcggcgaagctccgggacgagctctcggcgctccggacggtgcgc
gagcggcagcaggccaccatagcctccgaagagtccttcgacgccttcggggcctatgtc
gagggggagacggcctgcgtgcaggtctttgccgtgcgcgacggccaggtaacgggccgg
gactccttcctgctcgacaactacggagaggccgatgccgactcggtcgcgcttcagttc
atcccgcagttctacgatgcgacgcgcgttccgcgcgaggtgctcgtcgcctcggcggac
gaggaggctctggccccgatctcggagcatctctcggagcttcgcggcacgcgggtggat
gtccgcaggccgcagcggggcgacaagcggcgcatcctggagcttgcgcagcgcaatgca
gagatgagccttgagcacgagcggacgctcgaagaggcgcggcgcaaccaggtcgcctcg
acgctcgacgacctgatggaggaactggcgttgccccggctcccgctccgcatcgagtgc
tacgacatctcgaacacgatgggcacgaactccgtcgcctcgatggtcgtctttcagggc
ggccgcccggcgaagagcgagtaccggaggttccggataaagaccgtggagggcgcggac
gacttcgcaagcatggcggaggtgatccgccgcaggctcgaacgtctcaacgagggcgac
gagaagttccttccggctccggacctgatcctcctcgacggtggcaagggccaactctcg
gcggtcgttccggtcatggaggagctggacccggacgcggacatcccgctgcgatccctc
gccaagcgcgacgagtgggtcttcgagccgggcaagccggacccggtcgtccttgagcgc
aactctccgcacctgcgcctcctgcagcgcgtgcgcgacgaggcgcaccgcttcgccaac
acctaccacaagaagctccggggcaaggcgatgacggcctccgtgctcgacgagcttccc
ggcgtcggtccggcgcgcaaaaagaggatcctcgaccacttcggcacccccgatgccttt
atgaacgcctccgtcgaagagctcgaagaggtgcttcccggccgcgtcgcccgacaggtt
cacgcgcgcatccaccgctag
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