KEGG   Rhodospirillum rubrum F11: F11_02025
Entry
F11_02025         CDS       T02006                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
rrf00300  Lysine biosynthesis
rrf00470  D-Amino acid metabolism
rrf01100  Metabolic pathways
rrf01110  Biosynthesis of secondary metabolites
rrf01120  Microbial metabolism in diverse environments
rrf01230  Biosynthesis of amino acids
Module
rrf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F11_02025
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    F11_02025
Enzymes [BR:rrf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     F11_02025
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AEO46875
LinkDB
Position
complement(472310..473587)
AA seq 425 aa
MDYFSYRNGQLHAEDVALAAIAEAVGTPFYVYSAATLERHFRVFSDAFAGQPITLCFATK
TNGNKAVLALLAGLGAGADVVSQGEMEHALAAGVPAGRIVFSGVAKTKAEMAAALEAGIF
QINVESEPELEALSEVAQALGKTAPVALRINPDVAAATHDKIATGRKENKFGIDWTVAPA
IFAKAAGLPGIAVKGVAVHIGSQILDLDPFRRAFERLRELVLALRADGIALERVDLGGGL
GIPYHRDDPASPPPAEYAALARRIFGDLGVHLVAEPGRLIAGNAGMLVSRVVYRKQGETR
TFLILDAGFNDLIRPAMYDAFHDILPVTAAAENAVLTPVDVVGPICESGDIFARQRPLPP
IAAGDLVAFATAGAYGASMSSTYNGRPLVPEVMVSGDRFAVVRRRPSVAEMTALESVPPW
LAKQA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggattatttctcttaccgcaacggccaactccacgccgaggatgtcgccctcgccgcc
atcgccgaggccgtcggcacgcccttctatgtgtattcggccgccacgctcgaacgccat
ttccgggtgttctcggacgccttcgccggccagccgataaccctgtgcttcgccaccaag
accaatggcaacaaggcggtgctcgccctgcttgccggcctgggcgccggcgccgacgtg
gtcagccagggcgagatggaacacgccctggcggcgggcgtcccggccgggcgcatcgtc
ttttccggggtcgccaaaaccaaggccgaaatggccgccgcgcttgaggccggcatcttc
cagatcaacgtcgaatccgagcccgagctcgaggcgctgtccgaggtcgcccaggccctg
ggcaagaccgcgccggtcgccctgcgcatcaatcccgatgtcgccgccgccacccacgac
aagatcgccaccgggcgcaaggaaaacaaattcggcatcgactggaccgtcgcccccgcc
atcttcgccaaggccgccggcctgcccggcatcgccgtcaagggggtcgccgtccatatc
ggctcgcagatcctcgatcttgatcccttccgccgcgcttttgagcgcctgcgcgagctg
gtgctggccctgcgcgccgacggcatcgccctcgagcgtgtcgatcttggcggcggcttg
ggcatcccctatcaccgcgacgatccggcaagcccgccgccggccgagtacgccgccctc
gcccgccgcatcttcggcgacctgggcgtgcatctggtggccgaacccgggcggctgatc
gccggcaacgccgggatgctggtctcccgcgtcgtctatcgcaaacagggcgaaacgcgg
accttcctgatcctcgatgccggcttcaacgacctgatccgtccggcgatgtatgacgcc
ttccacgatatcctgccagtcacggccgccgccgagaacgccgtgctgaccccggtcgat
gtggtcgggccgatctgcgaatcgggcgatatcttcgcccgccagcgcccgctgccgccg
atcgccgcgggggatctggtggccttcgccaccgccggcgcctatggcgcctcgatgtcg
tccacctacaacggccggccgctggtgcccgaggtgatggtgtcgggggatcgcttcgcc
gtagtccgccgccgccccagcgtcgccgaaatgaccgctttggaatcggtgccgccgtgg
ctggccaagcaagcatag

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