Rickettsia rickettsii Morgan: RRM_06665
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Entry
RRM_06665 CDS
T03662
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rrm
Rickettsia rickettsii Morgan
Pathway
rrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RRM_06665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrm03400
]
RRM_06665
DNA repair and recombination proteins [BR:
rrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RRM_06665
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RRM_06665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
nSTAND3
AAA_25
RsgA_GTPase
ATPase
DnaJ_CXXCXGXG
NACHT
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AJG34936
LinkDB
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Position
complement(1200265..1203126)
Genome browser
AA seq
953 aa
AA seq
DB search
MNQEYIKVRGAKEHNLKNINVNIPRNKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIP
YSPATGLPIHSQTVSEMVDIINELPKGTKIYLLAPIVRGHKGEFKREIMNLKKQGFQKLI
VNGEVCEIDDLPKLDKNKKHNIEVIVDRIVLDESLGNRLADSLESSLNLAEGITYLEIVE
LPPAVKSEFEKNQRITFSEQYSCPVSGFQLTEIEPRIFSFNSPFGACPKCEGIGKEFFFD
RDLIVPDQRIAIKDGAIVPWGSTASKFILETLKALADHYKFSIEVPFVSLSQNVKDILFE
GSGEEAIKFEFHDGSKTQIIKQPFAGIIPSLQEKDRTIESVLIKEELAKFKSEHKCTACS
GFRLKDEALCVKIANFHIGEVAGMSIAALQKWFSHLEEKLNKKQLFIAERILKEITERLK
FLMNVGLDYLTLSREAGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNTRLI
ETLKRLRDLGNTVLVVEHDEETIYEADHIIDIGPGAGIHGGRVIAEGNAEEIKNCEESIT
GRYLSGRQTIKVPSETRVGHDNRAIELLGAVSNNLDNVDIKIPLGTFTAITGVSGSGKSS
LMIHTLYKAALKHLEPTSKVFPGKYRELKGLEYIDKIIDINQSPIGRTPRSNPATYTGAF
THIRDWFVELPESKARGYKVGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDICNG
HRYNRETLEIKYKGKSIADILMMTVEDAMQFFEKIPLIYEKLITLNEVGLGYIKIGQSAT
TLSGGEAQRVKLAKELSRRSTGKTLYILDEPTTGLHIDDINKLLKVLHKLVDMGNTVLVI
EHNLDVIKTADYIIDVGPEGGDKGGKIVVCGTPADIAACEESHTGRYLKQYLV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaatacattaaggtacgcggtgctaaagagcataatctaaaaaatataaat
gttaatattccaaggaataaatttgttgttatcaccggtcttagcggttcaggcaagtct
tctttagcgtttgatactatttatgcagaaggtcaaaggcgatatgttgaaagtttatct
tcatatgcaaggcaattcttacatttacaaaataaacctaatgtagaatctatttccgga
ttatcgcctgctattgcaattgaccaaaaaactacttccaaaaatccacgttctacggtt
ggaactataacggaaatttacgattatcttaggttattatatgcaagggtgggtattcct
tactctccggcaaccggtcttccgatacatagccaaacagtttccgagatggtagatata
attaacgaactacctaagggtacgaaaatatatttactcgctcctattgttagaggacat
aagggtgagttcaagcgtgaaattatgaatttgaaaaagcaaggctttcagaaattaata
gttaacggggaagtttgcgaaattgatgatttaccgaaacttgataaaaataagaagcat
aatatagaagtgatcgttgatagaatagttctagacgaaagtttaggtaatagacttgca
gatagcttagagagttcgttaaatcttgccgagggtattacttatttggaaattgtagaa
ttaccgccggcagttaagagcgagtttgaaaaaaatcagcgtattactttttccgagcaa
tattcttgtccggtatcgggttttcagcttactgaaatagagcctcgaatcttttctttt
aatagtccttttggagcatgtcctaaatgtgaagggataggtaaggagtttttctttgat
agagatttaatagtgccggatcaaagaattgctattaaagacggtgcaatagtgccttgg
ggtagtacagcttctaaatttatcctagagacattaaaggctcttgccgatcattataaa
ttttctattgaagtaccttttgtaagtttatcacaaaatgttaaggatattttatttgaa
ggttcaggagaagaggcaataaagtttgaatttcacgatggttctaaaacgcaaataata
aaacaaccttttgccggtataataccaagtttgcaagaaaaggaccgtactatagaatcg
gttttaattaaagaagaactagctaaatttaagtcagagcataaatgtactgcttgttca
gggtttagattaaaagacgaagcattatgcgttaaaatagcaaattttcatataggcgaa
gtagcaggtatgagtattgcagccttgcaaaaatggtttagtcacttagaagaaaaatta
aataaaaagcaattatttattgctgagcgtatactcaaagaaattaccgagagattaaaa
tttcttatgaatgtcgggcttgattatctaacgttatcacgagaagcaggtactttatcg
gggggggaaagtcagcgtattcgtcttgcatctcaaataggttcaggactgagcggtgtt
ttatatgtacttgatgagccgtctattggtcttcatcaacgagataatacaagattaatt
gagacactaaaaaggcttagagatttgggtaataccgttttggtagttgagcatgatgaa
gaaacaatatatgaagcagaccatattattgatataggaccgggagccggtattcacggc
ggtcgtgttattgcggaaggaaatgctgaagaaataaagaattgtgaagaaagtatcaca
ggtaggtatctaagtggtcgtcaaacaatcaaagtgccgtctgaaacaagagtagggcat
gataatagggcaattgaattacttggggcggtttccaacaatttagataatgttgatatc
aaaattccgcttggtacttttactgctataacgggagtatcgggaagcggtaaatcaagc
ttgatgattcatactctatataaagcggctctaaagcatttagagccaactagcaaagta
tttcccggcaaatatagagagttaaaaggacttgaatatattgataaaattatcgatatt
aatcaatctccgataggtagaactcctcgttcaaatcctgcgacttatacaggtgccttt
acccatattagggattggtttgtggagttacctgaatcaaaagctagagggtataaagta
ggcagattttcgtttaacgttaaaggtggtagatgtgaagcatgccaaggtgatgggcta
ataaaaatagagatgcatttcctacctgacgtatatgtaaagtgtgatatttgtaacggt
cacagatataatagagaaacgcttgaaataaaatataaaggtaaatctattgccgatatt
ttgatgatgactgtagaagatgcgatgcagttttttgaaaaaataccgttaatctatgaa
aaattaattaccttaaatgaagtgggtctaggctatattaaaatcggtcagtctgctact
actctttcaggtggtgaagcacaacgcgttaagcttgctaaagaattatcaagacgttca
accggtaaaacgctttatatacttgatgaaccgactacgggattacatatcgacgatatt
aataaattgttaaaagtgttacataaacttgttgatatgggcaataccgttttagttatc
gagcataatttagatgttataaaaactgcagattatattattgacgtcggtcctgaaggt
ggcgacaaaggcggtaagatagttgtatgtggcacccctgccgatatcgctgcctgtgag
gaaagccataccggtagatatttaaagcaatatttggtgtga
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