Rhinopithecus roxellana (golden snub-nosed monkey): 104654785
Help
Entry
104654785 CDS
T03989
Gene name
PKD1L3
Definition
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 3
KO
K04989
polycystin 1L3
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
104654785 (PKD1L3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rro04040
]
104654785 (PKD1L3)
Ion channels [BR:
rro04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104654785 (PKD1L3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
PLAT
GPS
Ion_trans
Lectin_C
Motif
Other DBs
NCBI-GeneID:
104654785
NCBI-ProteinID:
XP_010352383
LinkDB
All DBs
Position
20
AA seq
1731 aa
AA seq
DB search
MFFKGGSWLWLYIRTSIILGSELNSPGPHRQNNCYQFNRIHCSFEEAEHYCQGQRGFLAD
IWKQEVQDLIRDFLEEGKKWWIGQNVMPLKKHQDEKYPADVAAHGAPKPPSCTYLSRNVN
RISSKEGKCFLRHYFICQTDGILDRDAHYERNGNDSHLYQRPEKTKRGVEIARDKTPPGP
GPLSTSCHHPLPAHLSKTLCHPISPFPSVLQNITSQVTATSEPSSQPLPVITQLTTPVSV
THAGQSMAETTSSPKEAAHLNTVTSHLQVSLHNASGQVVDETAGNFSRAVHGLQAHNKLQ
EACEFLQKLTALTPRFVKPAQVNLINSLIYLSEELLRIPFLNNSSLDFKVHATVCPFHSC
NDVIKAEEGSWLESKRDTEQVEDILEMSLAELGNIGEAFLEQNRSSESSVTLTSSIASLL
LSRQNTSTLPLSSYTLGHPAPVRLGFPSALALKELLNQHPGVNVQVTGLAFNPFKDLDHR
NVVGSVGSVLLSANRKLLQVHDLVEDIEIMLWRNISMETHPTSFNMSTDQLTITVNITSL
EKSLIVSIDPDSPLLMTLYLGFQYQPNCTHFHLNITLPKDKVWQKDEEYTWVLTPEHLQH
GIGTYCIRAVLSESQKGAQQTPSLVSVITAVTQCYYWESHNQTWSSNGCQVGPQSTILRT
QCLCNHLTFFASDFFVVPRTVNVEDTVELFLRVTNNPVGVSLLAGLLGFYVITVVWAWKK
DQADMQKVKVTVLADNDPSAQFHYLIQVYTGYRRRAATTAKVVVTLYGSEGRSEPHHLCD
PQKTVFERGGLDVFLLTTRSPLGDLHSLRLWHDNSGVSPSWYVSQVIVCDMAVKRKWHFL
CNCWLAVDLGDCELDRVFIPVSKRELFSFRHLFSSMIVEKFTQDYLWLSVATRHPWNQFT
RVQRLSCCMTLLLCNMVINVMFWKINSTTAKRDEQLGPFAVAWSELLISIHTAVILFPIN
LVIGRLFPLIEPQETLPLFPPVQASCLSDASVEPLSATMVVEELKETVRFLLRRNTYLLS
KCEQPPWSSCDITKLVKLLSSLISSHLEGQSCHQQTERHLARVVPENHHHFCCYLRRVLQ
RLKSHLGTLGLTQGHQPCDFLDAASQLQKLQELLETHILPTEQEPSREVTSFAILSSEEG
KKFISNGLSKWLTAVCWLLLGLTSLASAFFTALYSLELSKDQATSWMISIILSVLQNIFI
SQPGKVVFFTFLYSLMISRMPRLNKEKEQQTKRILALLAKCSSSVPGSRDKNNPVYVAPA
MNSPTKRPERTLKKKKLFKLTGDILVQILFLTLLMTAICSVKDSNRFYLHQAIWKTFSPR
FSEIKLLQDFYPWANHILLPGLYGDYRGKSAVLKPSHCKYGVQLIFQIPCTTIYEKVKEG
QLVFSDXGRTCGHPKSLFPGLHLRRFSYICSPRPKGPIPADELHKRLTSKNDSGFSYIMR
SAFFTSVSLESFTSLQMSKKGFAWSVISQVIYYLLVCYYAFIQGCRLKWQKWRFFTGRRN
ILDTSIILISFIILGLDMKSISLLRKNMARYRDDQDRFISFHEAVKVNSAATHLVGFLVL
LATVQLWNLLRHSPRLRVISRTLSQAWDEVVGFLLIILILLTGYAVAFNLLFGCSISDYR
TFFSSAVTVVGLLMGISHQEEVIDLDPVLGTFLILTSVILMVLVVINLFVSAILMAFGKE
RKSLKKEVALIDMLLQKLSNLLGISRPQKTSSEQAATTAMGTDTGVLDELP
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaaaggaggaagctggctttggttatacatcagaacaagtatcattctagga
agtgaactaaacagcccagggccacataggcaaaataattgttaccagtttaacagaatt
cactgcagctttgaggaagcagagcattactgtcaggggcagagaggattcctagctgac
atttggaagcaggaagttcaagatctcatccgggactttctggaagaaggaaagaagtgg
tggattgggcaaaatgtaatgccactgaaaaagcatcaagatgaaaaatacccagcagat
gttgcagcccacggggccccaaagccccccagctgcacctacctgtccagaaacgtcaat
cggatctcatccaaagagggcaagtgcttcctgagacactatttcatttgccagactgat
ggcattttggacagagatgcccattatgaaagaaatggaaatgattctcatttgtaccag
agacccgagaagacaaaaagaggagttgaaatagcaagagacaaaacgcccccaggacct
ggtcctctttcaacctcatgtcaccatcctcttcctgctcatctgtccaagaccctgtgt
catcccatcagcccgtttccttcagtactacaaaatatcacatcacaggtaacagccaca
tctgaacccagcagccagcctctgcctgtgataacacagctcaccacgcctgtgtctgtc
acacatgctgggcaatctatggcagaaacaacttcaagcccaaaggaagcagctcatctg
aataccgtcacctctcatttacaagtgtcattgcataatgcatctggtcaggtcgtagat
gagacagcagggaacttcagcagagcagttcatggtttgcaagctcataacaaactacag
gaagcttgtgagttcctccagaaactaacagccttaaccccaagatttgttaagccagct
caggttaatctcatcaattcccttatttacctgagtgaggagttactcaggatcccattt
ctgaacaacagcagtctggacttcaaagttcatgcgactgtctgcccctttcattcctgc
aacgatgtcatcaaagctgaagaaggaagttggctggaatccaagcgtgatactgagcag
gtagaagacatcctggaaatgtccttggcagagcttgggaatatcggggaagcatttcta
gagcagaaccggtcttccgagtcttcagtgactttgacctcctccattgctagtctgctg
ctgagcagacaaaacacatccaccttaccactgagctcttacactctgggtcacccagcc
cctgtgagattgggctttccgtcggctttggctttgaaggagctcttgaatcaacaccca
ggagttaatgtccaagtaacaggactagctttcaatcccttcaaggatttggaccacaga
aacgttgttggaagcgttggaagtgtgttactaagcgctaatcgcaaattgctccaagtc
catgatttagtggaggacattgagattatgctctggagaaacattagcatggaaacccat
cccaccagcttcaacatgagcacagatcagcttacaatcacagtgaacatcacctccttg
gagaaatccctgatagtgagcatagatcctgacagtccccttttaatgacgctctacctg
gggttccagtatcagcctaactgtactcacttccacctgaacatcacccttccgaaggac
aaggtgtggcaaaaagatgaggagtacacgtgggtgctgactcctgagcatctacagcac
gggattggcacctactgtataagagctgtgctgagtgagagccagaagggtgctcagcag
acgcccagcttggtctcggtcatcacggccgtcactcagtgttattactgggagagccac
aaccagacatggagcagcaacggatgccaagttgggccacagagcacaattctgaggaca
cagtgtctctgtaaccacctgaccttctttgccagcgacttctttgtcgtgcccaggacc
gtgaatgttgaagacacggtggaactgttccttcgcgtgactaacaatcctgttggggtg
tcactgctggctggccttttaggattctatgtgatcacagttgtgtgggcttggaaaaag
gatcaagcagatatgcagaaggtgaaggtcactgtcctggctgataatgaccccagcgct
caatttcactaccttattcaggtctacaccggatatcgaagaagggctgctacaacagct
aaggttgtcgtcaccctctatggatcagagggacggagcgagccccatcacctctgtgac
ccccagaagacagtctttgaacgagggggcctggacgtcttccttctcaccactcggtcc
cctctaggggacctgcacagccttcggctctggcatgacaattccggcgtcagtccctcc
tggtatgtcagccaggtaattgtctgtgacatggcagtgaagaggaagtggcatttcctg
tgtaattgctggctggctgtggaccttggagactgtgagcttgaccgggtcttcatccca
gtttcaaagagagagctcttttcctttagacatctgttttcctccatgattgtagaaaag
ttcacccaggattatctgtggctttcagttgcaactcggcatccctggaaccagtttaca
agggtccaacggctgtcttgctgcatgacactgctactctgcaacatggtcatcaatgtt
atgttctggaagataaacagcaccactgccaagagagatgagcaattgggtccatttgct
gtggcctggtctgagctgctgatcagcatccacactgctgtcatcctcttccccatcaat
cttgtcattgggcggctcttcccgttgattgagccacaggagactctgcccctctttcct
cccgtccaggcctcctgcctctcagatgcttctgttgagcctctctctgccacaatggta
gttgaggaattaaaggaaactgtgagattcctgctcaggagaaatacatacctactctcc
aagtgtgagcagccgccatggagttcttgtgacattactaagctggtgaaacttttatcc
agcctcatatcgtctcacttggagggtcaaagctgtcatcagcagacagagcgccacttg
gcacgtgttgttcctgaaaaccaccatcatttctgctgttacctgcgtagagttctgcag
aggctgaaatctcacttaggcacgctgggtctcacccagggtcaccagccctgtgacttc
ctagatgcagccagccaacttcaaaaactccaggaactcttggaaacacacattcttccc
acagagcaagagccatccagagaagtcaccagttttgccatcctaagctcagaagaagga
aaaaagttcatctctaatggcctgtccaaatggttgactgcagtctgctggctcctccta
ggtctcactagcctggcttcagccttttttacagcactttatagcttggaattgagcaaa
gaccaagccaccagctggatgatttcaattattttatcagtgcttcaaaacatcttcatc
agccagccaggaaaggtggtcttcttcacattcttatactcactgatgataagcaggatg
ccacggcttaacaaagagaaggaacaacaaacaaagaggatcttggcgctcttggcaaaa
tgttcttcgtcagtaccaggttcaagagataagaacaaccctgtctatgtagccccagct
atgaatagtccaactaagcgtccagaaagaaccttgaaaaagaagaaactcttcaagctg
actggagatattttggtacaaatccttttccttaccctattgatgactgcaatctgctct
gtaaaggactccaatagattttacctccaccaagctatctggaagaccttttcgccccga
ttctcggaaatcaaacttcttcaggatttctacccctgggctaatcacatcctccttcct
ggcctgtatggggattacagaggtaagagtgcagtcctgaagcccagtcattgcaaatat
ggggtacaattaattttccaaataccctgtaccacgatctatgagaaagtgaaggaaggt
cagctggtgttttctgatnatggccgtacctgtgggcatcccaagagcttgttccctgga
cttcatctaaggaggttcagttacatctgttcacccaggcccaaggggccgattcctgct
gatgagcttcacaaaaggctgacaagcaagaatgacagtggattcagttacatcatgaga
agtgctttcttcacctcggtgagcctggaaagcttcacttcccttcagatgtcaaagaag
ggctttgcctggtctgtcatctcacaagtcatctattatctactggtctgttactatgcc
ttcatacagggttgtcggctgaaatggcagaagtggaggttcttcactgggagaagaaac
attctggacacaagtataatcctcattagcttcatcatcctggggcttgacatgaagagt
atttctctacttaggaaaaacatggcacgataccgcgatgaccaggacaggtttatcagc
ttccacgaggcagtaaaagtgaactctgctgcgactcaccttgtgggcttcctggttctg
ctggcaaccgttcagttatggaacctgctgcgtcacagccccaggttgcgggtcatcagc
aggacactgagccaagcctgggacgaggtggtgggctttctgctgatcatcctaatcctg
ctgacaggctatgccgttgcctttaacctgctgtttggatgcagcatctctgactaccgg
acatttttcagctcagcagtgactgttgttggtctcctgatgggaatttctcaccaagag
gaggttatcgatttagacccagtcctgggcacctttctgattctcaccagtgtcatcttg
atggtacttgtggtaattaatctttttgtttctgccattctcatggcctttggaaaagaa
agaaagtcgcttaagaaagaagttgcactaatagatatgctgctacagaagctctcaaat
ttgttaggaatcagtcggccccaaaaaacctcatctgagcaagcagccacgacagcaatg
ggcactgacactggagttttagatgaactaccttaa
DBGET
integrated database retrieval system
