KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104660656Help
Entry
104660656         CDS       T03989                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro05034  Alcoholism
rro05165  Human papillomavirus infection
rro05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rro00001]
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    104660656 (HDAC6)
  09164 Substance dependence
   05034 Alcoholism
    104660656 (HDAC6)
  09167 Infectious diseases
   05165 Human papillomavirus infection
    104660656 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:rro01009]
    104660656 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:rro03019]
    104660656 (HDAC6)
   04131 Membrane trafficking [BR:rro04131]
    104660656 (HDAC6)
   03036 Chromosome and associated proteins [BR:rro03036]
    104660656 (HDAC6)
Enzymes [BR:rro01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104660656 (HDAC6)
Protein phosphatases and associated proteins [BR:rro01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104660656 (HDAC6)
Messenger RNA biogenesis [BR:rro03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     104660656 (HDAC6)
Membrane trafficking [BR:rro04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    104660656 (HDAC6)
Chromosome and associated proteins [BR:rro03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104660656 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 104660656
NCBI-ProteinID: XP_010359388
UniProt: A0A2K6RIS1
LinkDB All DBs
Position
Un
AA seq 1215 aa AA seqDB search
MTSTGQDSTTTRQRRSRQNPQSPTQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAMEEDLIAGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTETVEGDNMEEDNVEENEEEGPWEPPVLPILTWPVLQSR
TGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCHTLTPRPATEAELLTCH
SAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACCLVEAVLSGEVLN
GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMF
EDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVE
DREGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGTITSASFGEESTPGQTKSET
AVVALTQDQSSEAATGGATLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGA
TLDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQ
TPLASSTDHQTPPTSPVQGTTPQISPSTLIGSLRTLELGSESQGASESQAPGEENLLGEA
AGGQDMADSMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTMQ
ENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKN
IAHQNKFGEDMPHPH
NT seq 3648 nt NT seq  +upstreamnt  +downstreamnt
atgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcagaacccc
caatctcccactcaggactccagtgtcacttcgaagcgaaacattaaaaagggagccgtt
ccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcggc
caagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaaccttgaggct
gaagcactggctgggactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccagaaggccctgagcggctccatgccatcaaagagcaactgatc
caggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtacatgaat
gagggagaactccacgtcctagcagacacttacgactcagtttatctgcatccgaactca
tactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
gctgagatccggaatggcatggccatcattaggcctcctggacatcacgcccagcacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctatgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcgctccac
acccttctgggagacccttgccccatgctggagtcacctggtgccccctgccggagtgcc
caggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgagaccgtggagggggacaacatggaggaggacaatgtagaggagaatgaggag
gaaggaccctgggagccccctgtgctcccaatcctgacgtggccagtgctacagtctcgc
acagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagccaccac
cctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggccttgct
gggcgctgccacaccctgacaccgcgccccgccacagaggctgagctgctcacctgccac
agtgctgagtacgtgggtcatctccgggccacagagaaaatgaaaacccgggagctgcac
cgtgagagttccaactttgactccatctacatctgccccagtaccttcgcctgtgcacag
cttgccactggcgctgcctgctgcctggtggaggctgtgctctcgggagaggttctgaat
ggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgcggtttt
tgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtgggcgtgcc
ctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcacatgttt
gaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcaccttcttc
cccatgggggatgagggtgccagcagtcagatcggccgggctgccggcacaggcttcacc
gtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcctggcat
cgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctcagctggc
tttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttatgcc
cacctcacccacctgctgatgggccttgccagtggccgcattatccttatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttgga
gacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcctcaatc
actgagactatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaa
gacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaaccagccaaa
cctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggcatggga
acgatcacctcggcatcatttggggaagagtccactccaggccagactaagtcagagaca
gctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagccacactg
gcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacctcagag
gaggctgtcgggggagccactccggaccagaccacctcagagaagactgtgggaggagcc
actctggaccagaccacctcagaggatgctgttgggggagccacgctgggccagactacc
tcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagccatggag
ggagccacactggaccagactacgtcagaggaggctccagggggcaccgagctgatccaa
actcctctagcctcgagcacagaccaccagacccccccaacctcacctgtgcagggaact
acaccccagatatctcccagtacactgattgggagtctcaggaccttggagctaggcagc
gaatctcagggggcctcagaatctcaggccccaggagaggagaacctactaggagaggca
gctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctcactgat
caggccatattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgc
cccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaacaatgcaa
gagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatggccac
atgctccaacaccatggaaattctggacacccgttggtcctcagctacatcgacctgtca
gcctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaac
atcgcccaccagaacaagtttggggaggatatgccccacccacactaa

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