Rhinopithecus roxellana (golden snub-nosed monkey): 104667787
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Entry
104667787 CDS
T03989
Symbol
COL7A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104667787 (COL7A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
DUF4992
Fndc10
Motif
Other DBs
NCBI-GeneID:
104667787
NCBI-ProteinID:
XP_010368649
LinkDB
All DBs
Position
1:57955700..57988222
Genome browser
AA seq
2943 aa
AA seq
DB search
MRLRLLVAVLCAGILAGAPRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRSF
LEGLVLPFSGAASAQGVRFATVQYSDDPRTEFSLDALGSGSDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDLVDTAAQKLKGQGVNLFTVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTRPPDDSTSAPRDLVL
SEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNIPAGETSVWLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVSGATGYHVTW
RVLSGGPTQQQELGPGQGSVLLRDLEPGTDYEVTMSTLFGHSVGPTTSLTARTDASVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRETGLEPPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPELPVGPVMDLQATELPGQRVRVSWSPVPSATQYRII
VRSTQGVERILVLPGSQTAFDLDDVQAGLSYTVRVSARVGPREGSASVLTVRREPETPLA
VPGLRVVVSDATRVRVAWGPIPGASGFRISWSTGSGPESSQTLPPDSTVTDITGLQPGTT
YQVAVSVLRGREEGPAAVIVARTDPLGPVRTVHVTQAGSSSVTISWTRVPGATGYRVSWH
SAHGPEKSQLVSGEATVAELDGLEPDTEYTVHVRAHVAGVDGPPASVVVRTAPEPVGRVS
RLQILNASSDVLRITWVGVTGATAYRLAWGRSEGGPMRHQILPGNTDSAEIRGLEGGVSY
SVRVTALVGDLEGTPVSIVVTTPPEAPPALGTLHVVQRGEHSLRLRWEPVPGVQGFLLRW
QPEGGQEQSRVLGPELNSYHLDGLEPATQYRMRLSVLGPAGEGPSADVKARTESPRVPST
ELRVVDTSIDSVTLAWTPVSRASSYILSWRPLRGPGQVPGAPQTLPGISSSQRVTGLEPG
VSYIFSLTPVLDGVQGPEASVTQTPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLVS
ALGPLGPQAVQVGLLSYSHRPSPLFPLNGSYDLGIILQRIRDMPYMDPSGNNLGTAVVTA
HRYVLAPDAPGRRQHVPGVMVLLVDEPLRGDIFSPIREAQAAGLKVVMLGMAGADPEQLR
RLVPGMDSVQTFFAVDDGPSLDRAVSGLAAALCQASFTTQPRPEPCPVYCPKGQKGEPGE
MGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPGRPGTPGTPGA
PGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGP
LGDPGPRGPPGLPGTSVKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPIGPP
GEKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPG
PAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGP
AGPRGATGVQGERGPPGLVLSGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRP
GPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGNQGDPGAD
GQNGSPGPSGSKGDRGEPGPPGLPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGA
PGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGLNGAAGK
AGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGD
SGAPGREGRDGPKGERGIPGILGPQGPPGLPGPLGPPGQGFPGVPGGTGPKGDRGETGSK
GEQGLPGERGLRGEPGSVPNVDRLLETAGIKVSALREIVETWDESSGSFLPVPERRRGPK
GDSGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGI
PGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGLPGPPGPKVSVDGPGP
ALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERGVA
GPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPG
PTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPG
LPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLMGEPGAKGDRGLPGPRGEK
GEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGLPGPPGVKGDLGLPGPPGAPG
VVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGDKG
DPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKGD
SAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRG
LPGPQGQPGAAGIPGDPGSPGKDGVPGIRGGKGDVGFMGPRGLKGERGVKGACGVDGEKG
DKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG
ERGTPGIGGFPGPRGSDGSAGSPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGAPGA
PGERGEQGRPGPAGLRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAA
DTAGSQLHAVPVLRVSHAEEEERVPPEDDEYSEYSEYSVEEYQDPEAPWDSDDPCSLPLD
EGSCTAYTLRWYHRAVPGGTEACHPFVYGGCGGNANRFGTREACERRCPPRVAXSQGTGA
TQD
NT seq
8832 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggcttctggtggccgtgctctgcgccgggatcctggcaggggcgccccga
gtgcgagcccagcacagggagagagtgacctgcacgcgcctttacgccgctgatattgtg
ttcttactggatggctcctcatccattggccgcagcaatttccgcgaggtccgcagcttt
ctcgaagggctggtgctgcctttctctggagcagccagtgcacagggtgtgcgctttgcc
acagttcagtacagtgatgacccacggacagagttcagcctggatgcacttggctctggg
agtgatgtgatccgcgccatccgtgagctcagctataaagggggcaacactcgcacaggg
gctgcaattctccatgtggctgaccgtgtcttcctgccccagctggcccgacctggtgtc
cccaaggtctgcatcctgatcacagatgggaagtcccaggacctggtggacacagctgcc
caaaagctgaaggggcagggagtcaatctgtttactgtggggatcaagaatgccgaccct
gaggagctgaagcgagttgcctcacagcccaccagtgacttcttcttcttcgtcaatgac
ttcagcatcttgaggacactactgcccctcgtttcgcggagagtgtgcacaactgctggt
ggcgtgcctgtgacccggcctccggatgactcaacctctgctccacgagacctagtgctg
tctgagccaagcagccaatccttgagagtacagtggacagcagccagtggccctgtgact
ggctacaaggtccagtatactcctctgacggggctgggacagccactgccgagtgagcgg
caggaggtgaacatcccagctggtgagaccagcgtgtggctgcagggtctccggccactg
actgagtaccaagtgactgtggttgccctctacgccaacagcatcggggaggcggtgagc
gggacagctcggaccactgccctggaggggccggaactgaccatccagaataccacagcc
cacagcctcctggtggcctggcggagtgtgtcaggtgccactggctaccatgtgacatgg
cgggtcctcagtggtgggcccacacagcagcaggagctgggccctgggcaaggttcagtg
ttgctgcgtgacttggagcctggcacggactatgaagtgaccatgagcaccctgtttggc
cacagtgtggggcccaccacttccctgacggctcgcactgatgcttctgttgagcagacc
ctgcgcccggtcatcctgggccccacatccatcctcctttcctggaacttggtgcctgag
gcccgtggctaccgcttggaatggcggcgtgagactggcttggagccaccacagaaggtg
gtgctgccctctgatgtaacccgctaccagttggatgggctgcagccgggcacagagtac
cgcctcacactctacactctgctggagggccgcgaggtggccacccctgcaaccgtggtt
cccactggaccagagctgcccgtgggccctgtgatggacctgcaagccaccgagctgccc
gggcagcgggtgcgagtgtcctggagcccagtccccagtgccacccagtaccgcatcatt
gtgcgcagcacccagggggttgagcggatcctggtgcttcccgggagtcagacagcgttc
gacttggatgacgttcaggctgggcttagctacactgtgcgggtgtctgctcgagtgggt
ccccgtgagggcagtgccagtgtcctcactgtccgccgggagccggaaaccccacttgct
gttccagggctgcgggttgtggtgtcagatgctacaagagtgagggtggcctggggaccc
atccctggagccagtggatttcggattagctggagcacaggcagtggtccagagtccagc
cagacactgcccccagactctactgtcacagacatcacagggctgcagcctggaaccacc
taccaggtggctgtgtctgtactgagagggagagaagagggccccgctgcggtcatcgtg
gctcgaacagacccactgggcccagtgaggacagtccatgtgactcaggccggcagctca
tctgtcaccatttcctggaccagggttcctggcgccacaggatacagggtttcctggcac
tcagcccacggcccagagaaatcccagttggtttctggggaggccacggtggctgagctg
gacgggctggagccagatactgagtatacggtgcatgtaagggcccatgtggctggtgtg
gatgggccccctgcctctgtggttgtcaggactgcccctgagcctgtgggccgtgtgtca
aggctgcagatcctcaatgcttccagcgacgttctgcggatcacctgggtaggggtcact
ggggccacagcttacagactggcctggggccggagtgaaggtggccccatgagacaccag
atactcccaggaaacacagactctgcagagatccggggtcttgaaggtggagtcagctac
tcagtgcgagtgactgcacttgtcggggaccttgagggcacacctgtctccattgtcgtc
accacgccgcctgaggctccgccagccctgggaacgcttcacgtggtgcagcgcggggag
cactcgctgaggctgcgctgggagccggtgcccggagtgcagggcttccttctgcgctgg
caaccagagggtggccaagaacagtcccgggtcctggggcccgagctcaacagctatcac
ctggacgggctggagccagccacacagtaccgcatgaggctgagtgtcctagggccggct
ggagaagggccctctgcagacgtgaaagcgcgcactgagtcacctcgtgttccaagcact
gaactacgtgtggtggacacctcgatcgactcagtgactttggcctggaccccagtgtcc
agggcatccagctacatcctatcctggcggccactcagaggccctggccaggtgcctggg
gccccgcagacacttccagggatctcaagctcccagcgggtgacagggctagagcctggc
gtctcttacatattctccctgacgcctgtcctggatggtgtgcagggtcctgaggcatcc
gtcacacagacgccagtgtgtccccgtggcctggcggatgtggtgttcctaccacatgcc
actcaagacaatgctcaccgtgcggaggctacgaggcgggtcctggagcgtctggtgtcg
gcacttgggcctcttgggccacaggcggttcaggttggcctgctgtcttacagtcaccgg
ccctccccactgttccccctgaatggctcctatgaccttggcattatcttgcaaaggatc
cgtgacatgccctacatggacccaagtgggaacaacctgggcacagccgtggtcacagct
cacagatacgtgttggcaccagatgctcctgggcgccgccagcacgtgccaggggtgatg
gttctgctagtggatgaacccttgagaggtgacatattcagccccatccgtgaggcccag
gctgctgggcttaaagtggtgatgttgggaatggctggagcagacccagagcagctgcgt
cgcttggtgccgggcatggactctgtccagaccttcttcgccgtggatgatgggccaagc
ctggaccgggcagtcagtggtctggccgcagccctgtgtcaggcatccttcactactcag
ccccggccagagccctgcccagtatattgtccaaagggccagaagggggaacctggagaa
atgggcctgagaggacaagttgggcctcctggcgaccctggcctcccgggcaggactggt
gctcctggcccccaggggccccctggaagtgccattgctaagggcgaaaggggcttccct
ggagcagatgggcgtccaggcagccctggccgccccgggactcctgggacccctggagcc
cctggcctaaagggctctccagggttgcctggccctcgtggggaaccgggagagcaagga
cctcgaggcccaaagggggagccgggggctcctggacaagtcattggaggcgaaggacct
gggcttcctgggcggaaaggggaccctggaccatcgggcccccctggacctcgtggacca
ctgggggacccaggaccccgtggccccccagggcttcctggaacatccgtgaagggtgac
aaaggtgatcgtggggagcggggtccccctggaccaggtgaaggtggcattgctcctggg
gagcccgggctgccgggtcttcccggaagccctggaccccaaggccccattggcccccct
ggagagaaaggagaaaaaggtgactctgaggatggagctccaggcctcccaggacaacct
gggtctccgggtgagcagggcccacggggacctcctggagctattggccccaaaggtgac
cggggctttccagggcccctgggtgaggctggagagaagggcgaacgtggacccccaggc
ccagcgggatcccgggggctgccaggggttgctggacgtcctggagcagagggtcctgaa
gggccaccaggacctaccggccgccaaggagagaagggggagcctggtcgtcctggggac
cctgcagtggtgggacctgctgtcgctggacccaaaggagaaaagggagatgtggggcct
gctgggcccagaggagctaccggagtccaaggggaacggggcccacctggcttggttctt
tctggagaccctggccccaagggagaccctggagaccggggtcccattggccttactggc
agagcaggacccccaggtgactcagggcctcctggagagaagggagaccctgggcggcct
ggccccccaggacctgttggcccccgaggacgagatggtgaagttggagagaaaggtgac
gagggtcctccgggtgacccaggtttgcctggaaaagcaggcgaacgtggccttcggggg
gcacctggagttcggggacctgtgggtgagaagggaaaccagggagatcctggagcggat
ggacaaaatggcagccctggaccatctggatccaagggtgaccgtggggagccgggtccc
ccaggactcccgggacggctggtagacacaggacctggggcaagagagaagggagagcct
ggggaccgtggacaagagggtcctcgagggcccaagggtgaccctggcctccctggagcc
cctggggataggggcatagatgggcttcgcgggcccccaggcccacagggggacccaggt
gtccgaggcccagcaggagaaaagggtgaccggggtccccctgggctggatggccggagc
ggactggatgggaaaccaggagcctccgggccccctgggctgaatggtgctgcaggcaaa
gctggggacccagggagagacgggcttccaggcctccgtggagaacagggccccccgggc
ccctctggtccccctggattactgggaaagccaggcgaggatggcaaacctggcctgaat
ggaaaaaacggagaacctggggaccctggagaagacgggaggaagggagagaaaggagat
tcaggtgcccctgggagagaaggtcgtgatggccccaagggtgagcgtggcattcctggt
atccttggaccccagggccctccaggcctcccagggccactgggccctcctggccagggt
tttcctggtgttccaggaggcacgggccccaagggtgaccgtggggagactggatccaaa
ggggagcagggtctccctggagagcgtggcctgcgaggagagcctggaagtgtgccgaac
gtggatcggttgctggaaactgctggcatcaaggtgtctgccctgcgggagatcgtggag
acctgggatgagagctccggtagcttcctgcctgtgcccgaacggcgtcgaggccccaag
ggggactcaggcgagcggggctccccaggcaaggagggccccatcggctttcctggagaa
cgcgggctgaagggagaccgtggagaccctggccctcaggggccacctggcctggccctt
ggggaaaggggcccccctggacctcccggccttgccggggagcctggaaagcctggtatt
cctgggctcccaggcagggctgggggtgtgggagaggcaggaaggccaggagagagggga
gaacggggagagaaaggagaacgtggagaacagggcagagatggccctcctggcctccct
ggaacccctgggctccctggaccccctggccccaaggtgtctgtggatgggccaggtcct
gcactctctggagaacagggaccccctggactcaagggtgctaagggggagccgggcagc
gatggtgaccgaggtcccaaaggagacaggggtgtgccaggcatcaaaggagaccgggga
gagcctggaccgaggggccaggatggcaacctgggtctaccaggagagcgtggcgtggct
gggcctgaagggaagccgggtctgcagggtccaagaggaccccctggcccagtgggtggt
catggagaccctggaccacctggtgccccgggtcttgctggccctgcaggaccccaggga
ccctctggcctgaagggggagcctggagagacaggacccccaggacggggcctgcctgga
cctactggagctgtgggacttcctggtccccctgggccttcgggccttgtgggtccacag
gggtctccaggtttgcctggacaagtgggggagacagggaagccgggagccccaggtcga
gatggtgccggtggaaaagatggagacagagggagccctggtgtgccagggtcaccaggt
ctgcccggccctgtcggacctaaaggagaacctggccccacgggggcccctggacaggct
gtggtcgggctccctggagcaaagggagagaagggagcccctggaggccttgctggagac
ctgatgggtgagccgggagccaaaggtgaccgaggactgccagggccgcgaggcgagaag
ggtgaagctggccgtgcaggggagcccggagaccctggggaagatggtcagaaaggggct
ccaggacccaaaggtttcaagggtgacccaggagttggggtcccaggctcccccgggctg
cctggccctccaggtgtgaagggagatctgggcctccctggcccccctggtgctcctggt
gttgttgggttcccgggtcagacaggccctcgaggagagatgggtcagccaggccctagc
ggagagcggggtctggcagggcccccagggagagaaggagttccaggccccttggggcca
cctggaccaccggggtcagtgggaccacctggggcctctggactcaaaggagacaaggga
gaccctggagcagggctgcccgggccccgaggcgagcgtggggagccaggcgtccggggt
gaagatggccgccctggccaggagggaccccgaggactcacggggccccctggcagcaga
ggagagcgtggggagaagggtgatgttgggactgcaggactaaagggcgacaagggagac
tccgctgtgatcctggggcctccagggccacggggtgccaagggggacatgggcgaacga
gggcctcggggcttggatggtgacaaaggacctcggggagacagtggggaccctggtgac
aagggcagcaagggagagcctggtgacaagggctcggctgggtcgccaggactgcgtggg
ctcccaggaccccagggtcaacctggtgcagcagggatccctggtgacccgggctcccca
ggaaaggatggagtgcctggcatccgaggaggaaaaggagatgttggcttcatgggtccc
cggggcctcaagggtgaacggggagtgaagggagcctgtggcgttgatggagagaaggga
gacaagggagaagctggtcccccaggccgccccgggctggcaggacacaaaggagagatg
ggggagcctggtgtgccgggccagtcgggggcccctggcaaggagggcctgatcggtccc
aagggtgaccgaggctttgatgggcagccaggccccaagggtgaccagggcgagaaaggg
gagcggggaaccccaggaattgggggcttcccaggccccaggggcagtgatggctctgct
ggttccccggggccacctggcagtgttggtcccagaggccctgaaggacttcagggccag
aagggtgagcgaggtccccctggagagagagtggtgggggctcctggggcccctggagcc
cctggcgagagaggggagcaggggcggccaggacctgctggcctccgaggcgagaaggga
gaagctgcactgacggaggatgacatccggggctttgtgcgccaggagatgagtcagcac
tgtgcctgccagggccagttcatcgcatccggatcacgacccctccctagttatgctgca
gacactgccggctcccagctccatgctgtgcctgtgctccgagtctctcatgcagaggag
gaagagcgggtgccccctgaggatgatgagtactccgaatactccgagtattccgtggag
gagtaccaggaccctgaagccccttgggatagcgatgacccctgttccctgccactggat
gagggctcctgtactgcctacaccctgcgctggtaccatcgggctgtgccaggtggcaca
gaggcctgtcacccttttgtctatggcggctgtggagggaatgccaaccgttttgggacc
cgtgaggcctgtgagcgccgctgcccaccccgagtggcctagagccaggggacaggtgct
acccaggactga
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integrated database retrieval system