Rhinopithecus roxellana (golden snub-nosed monkey): 104675745
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Entry
104675745 CDS
T03989
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03082
ATP-dependent chromatin remodeling
rro04714
Thermogenesis
rro05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104675745 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
104675745 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
104675745 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rro03000
]
104675745 (ARID1A)
03021 Transcription machinery [BR:
rro03021
]
104675745 (ARID1A)
03036 Chromosome and associated proteins [BR:
rro03036
]
104675745 (ARID1A)
Transcription factors [BR:
rro03000
]
Eukaryotic type
Helix-turn-helix
ARID
104675745 (ARID1A)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104675745 (ARID1A)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104675745 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104675745
NCBI-ProteinID:
XP_010378704
LinkDB
All DBs
Position
12:15746793..15833992
Genome browser
AA seq
2286 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGSGAGGGGGPGAEPDLKNSNGNAGPRPALNNNLTEP
PGAGGGGSSDGVGVPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPG
SGAAAAPGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYP
GQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHP
QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQTPYSQQPSQPPHQQSPTPYPSQQ
STTQQHPQSQPSYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP
PPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA
VPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSG
GQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAG
GQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETA
VAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNS
AGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP
ERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELAT
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDST
FQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD
PYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGM
YSPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP
PAKRHEGEMYSVPYNTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATA
TAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQ
GRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSA
PVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPP
VPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDP
GQRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVAENDEEIAFSGKDKPASE
NSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHF
ESKTELLPSRPHVPCPPAPRKHVTAAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRS
STLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAK
RCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQ
GVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEA
QDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRK
NPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ
NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVL
FLIGQS
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cctgccgtggggccgccgcagccgctgggaaaggagctgcaagacggggccgagagcaat
gggggtggcggcggcagcggagccggcggcggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg
cccggcgccggcggtggcggcagcagcgatggggtgggggtgcctcctcactcagccgcg
gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgct
gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcag
aactctcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggctcccggctccaagccgcctccctcctccagcgcctccgcctct
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcc
gcggctggcgggggaactccccagcccaccgccacccccaccctcaaccaactgctaacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcagcggcggcggcggcggcggccgcttcgggaggggcccaacaaaggagccac
cacgcgcccatgagccccgggagcagtggcggcggggggcagccgctcgcccggacccct
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcagcaacagggacctccgtcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcg
cagagtgccatgggcggcctctcttatacacagcagattcctccttatggacaacaaggc
cccagcgggtatggtcaacagggccagactccatattacaaccagcaaagtcctcaccct
cagcagcagcagccaccctactcccagcaaccaccgtcccagacccctcatgcccaacct
tcgtatcagcagcagccacagtctcagccaccacagctccagtcctctcagactccatac
tcccagcagccatcccaacctccacatcagcagtccccgactccatacccctcccagcag
tccacgacacagcagcacccccagagccagccctcctactcacagccacaggctcagtct
ccctaccagcagcagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcg
tatcctcagccccagtctcagcagtcccagcaaactgcctattcccaacagcgcttccct
ccaccgcaggagctatctcaagattcatttgggtctcaggcatcctcagccccctcaatg
acctccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccctccagc
ttgcctgatctatctggttcaatagatgacctccccatggggacagaaggagctctgagt
cctggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcag
tctcctttttctcctcatacttcccctcacctgcctggcatccgaggcccctccccgtcc
cctgttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgca
gtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcat
ccttccatgaaccaatcaagcattgcccaagatcgaggttatatgcagaggaacccccag
atgccccagtacagttccccccagcccggctcagccttatctccgcgtcagccttccgga
ggacagatacacacaggcatgggctcctaccagcagaactccatggggagctatggtccc
caggggggtcagtatggcccacaaggtggctaccccaggcagccaaactataatgccttg
cccaatgccaactaccccagtgcaggcatggctggaggcataaaccccatgggtgccgga
ggtcagatgcatggacagcctggcatcccaccttacggcacacttcctccagggaggatg
agtcacgcctccatgggcaaccggccttatggccctaacatggctaatatgccacctcag
gttgggtcagggatgtgtcctccaccagggggcatgaaccggaaaacccaagaaactgct
gtcgccatgcatgttgctgccaactctatccaaaacaggccgccaggctaccccaatatg
aatcaagggggcatgatgggaactggacctccttatggacaagggattaatagtatggct
ggcatgatcaaccctcagggacccccatattccatgggtggaaccatggccaacaattct
gcagggatggcagccagcccagagatgatgggccttggggatgtcaagttaactccagcc
accaaaatgaacaacaaggcagacgggacacccaagacagaatccaaatccaagaaatcc
agttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcct
gagaggaagatgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatg
acaaatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtg
aaggagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaacc
aacctcaatgtgggcacatcaagcagtgctgcaagctccttgaaaaagcagtatatccag
tgtctctatgcctttgaatgcaagattgaacggggagaagatcctcccccagacatcttt
gcagctgctgattccaagaagtcgcagcccaagatccagcctccctctcctgcgggatca
ggatctatgcaggggccccagactcctcagtcaaccagcagttccatggcagaaggagga
gacttaaagccaccaactccagcatccacaccacacagtcagatccccccattgccaggc
atgagtaggagcaattcagttgggatccaggatgcctttaatgatggaagtgactccaca
ttccagaagcggaattccatgactccaaaccctgggtatcagcccagtatgaatacctct
gacatgatggggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaa
gctccagggagtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgac
ccctacagtcgtgctgctggccctgggctaggaaatgtggcgatgggaccacgacagcac
tatccctatggaggtccttatgacagagtgaggacggagcctggaatagggcctgaggga
aacatgagcactggcgccccacagcctaatctcatgccttccaacccagactctgggatg
tattctcctagccgctaccccccacagcagcagcagcagcagcaacgacatgattcctat
ggcaatcagttctccacccaaggtaccccttctggcagccccttccccagccagcagacc
acaatgtatcaacagcagcagcagaattacaagcggccaatggatggcacatatggccct
cctgccaagcggcatgaaggggagatgtacagcgtgccatacaacactgggcaggggcag
cctcagcagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcc
cagccttcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgcc
accgctgctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagttt
ggccgagaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaa
atgatgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcag
gggcgtaatgacatgacctataattatgccaacaggcagagcacgggctctgctccccag
ggccccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggcc
aaccacgaaggcccgtggccttcccatggcacacgccagcccccatatggtccctctgcc
cctgtgccccccatgacaaggccccctccatctaactaccagcccccgccaagcatgcag
aatcacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacc
tctcctagcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtccccca
gtacctgcctcgcacatagcacctgcccctgtgcagccccccatgattcggcgggatatc
accttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctc
acaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggt
ctcctggcagagagcacatgggcattagataccatcaacatcctgctatatgatgacaac
agcatcatgaccttcaatctcagtcagctcccagggttgctagagctccttgtagaatat
ttccgacgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgaccca
ggacagagaacactactggatcctgggaggttcagcaaggtgtctagtccagctcccatg
gagggtggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagag
gaagtagctgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagag
aatagtgaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaag
aatgatccttttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagt
ggcctgctgcactggcggattggtgggggggacaccactgagcatatccagacccacttc
gagagcaagacagagttgctgccttcccggcctcatgtaccctgcccaccagccccccgg
aagcatgtgacagcagcagagggtacgccagggacaacagaccaggagggacccccacct
gatggacctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtct
agcaccttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagttt
ccattcggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccc
cacagtaaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaag
cgctgtgtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgacttt
gagatgtccaaacacccagggctgctgctcatcctgggcaaactgatcctgctgcaccac
aagcacccagaacggaagcaggcaccactaacttatgagaaggaggaggaacaggaccaa
ggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaac
accttggttacactcgccaacatctcggggcagttggacctatccccataccctgagagc
atttgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcc
caggaccccttttccaccctgggccccaatgccgtcctttccccccagagactggtcttg
gaaaccctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacgccc
cccttcagtcgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaag
aacccggtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagc
ctggcagctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttccta
gaggacagccttgccgccacgcagttccagcagagccaggccagcctcctccacatgcag
aacccaccctttgagccaaccagtgtggacatgatgcggcgggctgcccgcgcgctgctt
gccctggccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttg
gacatctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactg
tttttgattggccagtcatga
DBGET
integrated database retrieval system
