KEGG   Rhodococcus rhodochrous: 4535765_02240
Entry
4535765_02240     CDS       T05521                                 
Name
(GenBank) DNA end-binding protein Ku
  KO
K10979  DNA end-binding protein Ku
Organism
rrt  Rhodococcus rhodochrous
Pathway
rrt03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    4535765_02240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrt03400]
    4535765_02240
DNA repair and recombination proteins [BR:rrt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     4535765_02240
SSDB
Motif
Pfam: Ku HC2 TF_Zn_Ribbon UL11 DUF4604
Other DBs
NCBI-ProteinID: SNV18736
LinkDB
Position
1:complement(2411084..2412124)
AA seq 346 aa
MRSIWKGSLAFGLVNVPVKVYSATESHDISFHQVHAKDGGRIKYQRVCTECGEVVPYQDI
DKAYDSEDGERVVLTDEDFDKLPAAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYGLLAATLEQSDRTALVHFTLRQRTRLAALRTRDGLLILQTLLWPDEVRAAEFESLDDI
EKPKQRELAMAETLVESMSDDFDPTEFTDEYQVELRTLIDEALARGGEKVFQVAEPDTDE
EDAEVLDLVAALQRSVDAADKKVPSGSSSGGKKSSKDDDEDEDEGAKKKAPAKKTASKST
ASKSTAKKSPAKKSTAKKTASKSAAAKKSPAKKTAAKKTSGERKGA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgcggtcgatctggaaaggctcactcgcgttcggcctcgtcaacgtcccggtgaaggtg
tattcggccaccgagtcgcacgacatctccttccaccaggtgcacgcgaaggacggcggg
cggatcaaatatcagcgcgtgtgcaccgagtgcggtgaggtcgtcccctaccaggacatc
gacaaggcgtacgactccgaggacggcgagcgggtggtgctcaccgacgaggatttcgac
aagctccccgccgccgagaagcacgagatcccggtgctgcagttcgtgcccaccgagcag
atcgatccgatcctgttcgagaagtcctactatctcgaacccgattcgtcgtcgccgaag
gcctacggcctgctcgccgcgaccctcgaacagagcgaccggacggcgctggtgcacttc
acccttcgtcagcgcacccggttggcggcgctgcgcacccgcgacggactgctcatcctg
cagaccctgttgtggcccgacgaggtccgcgcggccgagttcgagtcgctggacgacatc
gagaagccgaagcaacgcgaactcgcgatggccgagaccctcgtcgagtcgatgtccgac
gatttcgatcccaccgagttcaccgacgagtaccaggtggaactgcgcaccctgatcgac
gaggccctcgcccgcggcggcgagaaggtcttccaggtcgccgaacccgacaccgacgaa
gaggacgccgaggtcctcgacctcgttgcggccctgcagcgcagcgtcgacgcggcggac
aagaaggtcccctccggttcgtcctccggcgggaagaagtcctcgaaggacgacgacgaa
gacgaggacgagggcgcgaagaagaaggcccccgcgaagaagaccgcatcgaagagcacg
gcgtcgaagagcacggcgaagaagagtcccgcgaagaagagcacagcgaagaagaccgcg
tccaagagtgcggcggccaagaagagtcctgcgaagaagacggccgccaagaagacctcc
ggcgaacgcaaaggcgcctga

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