Rathayibacter rathayi: C1O28_10870
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Entry
C1O28_10870 CDS
T05845
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rry
Rathayibacter rathayi
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rry03400
]
C1O28_10870
Enzymes [BR:
rry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C1O28_10870
DNA repair and recombination proteins [BR:
rry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C1O28_10870
Prokaryotic type
C1O28_10870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZZ49624
LinkDB
All DBs
Position
2270810..2272276
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AA seq
488 aa
AA seq
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MSDTSPTLVWLRDDLRLADNPALRAAIDRGGEIAVCYVLDEESAGIRPFGGASRWWLHGS
LAALAADLHEHGAALILRRGPAEAVVLQLADEIGAGAVHWNRRYGKAERIVDAAVKESLR
NGGREAESHQGSLLFEPWTAQTGAGGPYSVYTPFARACRAKQTPRAPLPRPRSLDGVTGD
VASDSLDDWELLPAHPDWAGGLRERWVPGEKAAADRLRAFLAEQLDDYADGRDQPAEDAT
SNLSPHLRWGEISPFQVWHALEEAHTKGLHRGDGSDRFLSELLWREFCYHLLFHWPDLAT
ANFDTRFDSFPWGRPGQEAIDAWHRGRTGYPLVDAGMRELWNTGYMHNRVRMVTASFLIK
NLLVDWRVGEDWFWDTLVDADPASNAANWQWVAGSGADASPFFRVFNPVTQSKKFDPAGA
YIRDNVPELSEVEGAAVHEPWTLEDTLTGGPDAYPAPILDLKETRAHALDAFAQIKSAPR
DITPRGGD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacctcccccacccttgtctggctccgcgacgatctgcgcctggccgacaac
cccgctctgcgcgccgcaatcgaccgcggcggcgagatcgcggtctgctacgtgctcgat
gaggagtcggcggggatccggccattcgggggcgcctcccgctggtggctgcacggcagc
ctcgcagccctcgccgccgacctgcacgagcacggagcggcgctgatcctgcgccgagga
ccggccgaggccgtcgtcctgcagctcgccgacgagatcggtgccggagccgtgcactgg
aaccgccgctacggaaaggccgagcgcatcgtcgacgcggcggtgaaggagtcgctccgc
aacggtggacgcgaggccgagagccaccagggctccctgctgttcgagccgtggacggcg
cagaccggcgctggcggcccgtactccgtctacacgcccttcgcgcgcgcctgccgcgcc
aagcagacaccgcgggcgccgctgccccgtccccgctcgctcgacggcgtcacaggcgac
gtcgcctccgattccctcgacgactgggagctgctgcccgcgcatcccgactgggcagga
ggactgcgcgagcgctgggttcccggcgagaaggcggcggccgaccggctgcgcgcgttc
ctcgcggagcagctcgacgactacgccgacggccgcgaccagcccgccgaggacgccacc
tcgaacctctcgccgcacctgcggtggggcgagatcagtccgttccaggtgtggcacgcg
ctggaggaggcgcacacgaaggggctgcaccgcggcgacggcagcgaccggttcctgtcc
gagctgctctggcgggagttctgctaccacctgctgttccactggccggacctggcgacc
gcaaacttcgacacccggttcgactcgttcccgtggggccgccccggtcaggaggcgatc
gacgcctggcaccggggccgcaccggctacccgctggtggacgccggcatgcgcgagctc
tggaacaccggctacatgcacaaccgggtccggatggtgaccgcttcgttcctgatcaag
aatctgctggtcgactggcgggtgggcgaggactggttctgggacaccctcgtcgacgcg
gatccggcgagcaacgccgcgaattggcaatgggtagcgggctccggagccgacgcgtcg
ccgttcttccgagtcttcaacccggtcacccagtcgaagaagttcgatccggccggagcg
tacatccgcgacaatgtgcccgaattgagcgaggtggagggcgcagccgtgcacgagccg
tggacgctcgaggacacgctcactggcggtccggacgcctaccccgcaccgatactcgac
ctcaaggagacacgggcccacgcgctcgacgctttcgctcaaatcaagagcgctccacgc
gacatcacgcctcgaggaggcgactga
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