Ralstonia solanacearum CFBP2957: RCFBP_10893
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Entry
RCFBP_10893 CDS
T01272
Name
(GenBank) Putative regulatory protein ada (Regulatory protein of adaptative response) [Includes: Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase)]
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCFBP_10893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsc03000
]
RCFBP_10893
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_10893
Enzymes [BR:
rsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RCFBP_10893
Transcription factors [BR:
rsc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RCFBP_10893
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RCFBP_10893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CBJ42196
LinkDB
All DBs
Position
complement(927672..929153)
Genome browser
AA seq
493 aa
AA seq
DB search
MHLDHDACYHAVQSRDRRFDGWFFVGVTSTGVYCRPICAVRTPLQKNCRFFATAAAAEKA
GFRPCLRCRPELAPGHSLAEMSSSLARAAARMIDEGFLQQHDLAALAAAVGVTDRHLRRI
FRVEFDVSPIEYAQTQRLLLAKQLLTDTDMPVGDIAYAAGFGSVRRLNSGFAEHYGFAPT
RLRTRAAPVPRSDDGATLMLGYRPPFAWHALLDFLRARAVDGVEAVDAHSYARTLALDYA
GRRHAGWLHARDVPQRHAVALTLSASLMQAMPPVLARVRRLFDLDCRPDLVDAHLGTLAA
GTPGLRVPGAVDGFEIAVRAIAGQVVSLAQARRILARLVVAHGTPLAQPRAGLPMAFPSA
AALAGSDPLTLSRETGLQASRAAAVVEIARAIDAGRLRLEPLVPLAPTLAALQALPGIGE
WTAQYIAMRALGWPNAFPLGDYVLRKRLADHDGALPTRHAMATRAEGWAPWRAYAAMHLW
HRDVALAAPAPTP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgaccacgacgcctgctaccacgccgtgcaatcgcgcgaccggcgcttcgat
ggctggttcttcgtcggcgtcacctccactggcgtctattgccgcccgatctgcgcggtg
cgtacgccgctgcagaagaactgccgcttcttcgccaccgccgccgcggccgagaaagcg
ggcttccgcccgtgcctgcgctgccgtccggaactggcaccgggccacagcctggccgag
atgtcgtccagtctcgcccgcgccgcggcgcgcatgatcgacgaaggttttctgcagcag
catgacctggcggcgctggcggcagcggtcggtgtgacggaccgtcacctgcgccgcatc
ttccgcgtcgaattcgacgtctcgcccatcgagtacgcacagacgcagcgcctgctgctc
gccaagcaactgctgaccgacaccgacatgccggtcggcgacatcgcgtatgcggccggc
ttcggcagtgtgcggcggctcaacagcgggttcgccgagcactacggcttcgcgccgaca
cgactgcgcacccgcgcggccccggtgccccgcagcgacgacggcgccacgctgatgctg
ggttaccgcccgcccttcgcctggcacgcgctgctcgatttcctgcgcgcgcgggccgtg
gacggcgtcgaggcggtcgatgcgcacagctacgcccgcaccctcgcgctcgactatgcc
ggccgccgccatgccggctggctgcacgcgcgcgacgtgccgcaacggcatgcggtcgcg
ctcacgctgtcggccagcctgatgcaggcgatgccgccggtcctggcgcgcgtgcgccgg
ctgttcgatctcgattgccggcccgacctggtcgacgcgcacctcggcacgctcgccgcc
ggcacgcccggcctgcgcgtaccgggcgcggtggacggcttcgagatcgccgtgcgcgcc
atcgcggggcaggtcgtttcgctggcgcaggcgcggcgtatcctggcccgcctggtggtc
gcccatggcacgccgctggcacagccgcgggcgggattgccgatggccttcccgtccgcc
gccgcactggcgggctcggacccgctgacactgtcccgcgagaccgggctgcaggccagc
cgcgccgccgccgtggtggaaatcgcccgcgccatcgacgccggccgcctgcgcctggaa
ccgctggtgccgctcgcccccacgctggcggcattgcaggcgctgcccggcatcggcgaa
tggactgcgcaatacatcgccatgcgcgcgctgggctggccgaatgcattcccgctgggc
gattacgtcctgcgcaaacgcctggccgaccacgatggcgcactgccgacacgccatgcc
atggccacccgcgccgaaggctgggcaccgtggcgcgcctatgccgccatgcacctgtgg
caccgcgacgtcgccctggccgcgccggcccccaccccatga
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