Ralstonia solanacearum CFBP2957: RCFBP_20469
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Entry
RCFBP_20469 CDS
T01272
Symbol
uvrB
Name
(GenBank) ATP-dependent DNA excision repair enzyme, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCFBP_20469 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_20469 (uvrB)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCFBP_20469 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCFBP_20469 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
Kinesin
AAA_22
AAA_16
Mu-like_Pro
Nab1
UvrD-helicase
HEM4
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBJ43657
LinkDB
All DBs
Position
complement(2432737..2434827)
Genome browser
AA seq
696 aa
AA seq
DB search
MTDLSQVPSPYDESKFVAFEGSPFQLYQPYPPAGDQPGAIRQLLEGIGDGLSYQTLLGVT
GSGKTYTMANVIAQAGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPTEYHQMILTL
RTGDRISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLELFDDEV
DSLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIGAIKAELRERLDFFYKENKLV
EAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAQPGEPPPTLVDYLPPDALMFLDESH
VLIGQFNGMYNGDRARKETLSEYGFRLPSALDNRPLKFAEFEGKMRQVVFVSATPADYEK
QRAGDEVVEQVVRPTGLVDPIIHVRPATTQVDDLLSEIHERVKAGERVLVTTLTKRMAEQ
LTEFLSEHGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGTAILYADRITDSMRRAIGETERRRAKQIAHNEA
HGITPRGVVKRIKDIIDGVYNVDDARAELKAAQEAARYEDMSEKQVGKEIKRLEKQMLDH
AKNLEFEKAAAVRDQLAKLKSQVFGASGEDHIAPAA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcagccaagtccccagcccgtacgatgagtcgaagttcgtcgcgttcgag
ggctcgccgttccagctgtaccagccgtatccgcccgccggcgaccagcccggggcgatc
cgccagctgctcgagggcatcggggacggcctgtcgtaccagaccctgctgggcgtgacg
ggctcgggcaagacctacaccatggccaacgtgatcgcgcaggcggggcggcccgcgatc
gtgttcgcgcccaacaagacgctggcggcgcagctgtattcggagttccgcgagttcttc
ccgcgcaacgcggtcgagtacttcgtctcgtactacgactactaccagccggaagcctac
gtgccgcagcgcgatctcttcatcgagaaggattcgtcggtcaacgagcatatcgagcag
atgcggctgtcggccaccaagagcctgctggagcggcgcgacgtggtgatcgtggcgacc
gtctcagccatctacgggatcggcaatccgaccgagtatcaccagatgatcctgacgctg
cgcaccggcgacaggatcagccagcgcgacgtgatcgcgcgcctgatcgccatgcagtac
acgcgcaacgagacggatttccagcgcggcacctttcgcgtgcgcggcgacaccatcgac
atctttcccgccgagcacgccgagatggcggtgcggctggagctgttcgacgacgaggtc
gattcgctgcagctgttcgatccgctcaccgggcgcgtgcggcagaagatcccgcgcttc
acggtctatccgtcgagccactacgtgacgccgcgcgagaccgtgctgcgcgccatcggg
gccatcaaggccgagctgcgcgagcggctggatttcttctacaaggagaacaagctggtc
gaggcgcagcgcctggagcagcgcacgcgcttcgacctggagatgctgcaggagctgggc
ttctgcaagggcatcgagaactattcgcggcacctgtcgggcgcccagccgggcgagccg
cccccgaccctggtcgactacctgccgccggacgcgctgatgttcctggacgaatcgcac
gtgctgatcggccagttcaacggcatgtacaacggcgaccgcgcgcgcaaggagacgctg
tccgagtacggcttccgcctgccgtcggcgctggacaaccggccgctgaagttcgccgag
ttcgagggcaagatgcggcaggtggtcttcgtgtcggccacgccggccgactacgagaag
cagcgcgccggcgacgaggtggtcgagcaggtggtgcgtcccaccggcctggtcgatccg
atcatccatgtgcggccggccaccacgcaggtggacgacctgctgtcggagatccacgag
cgcgtcaaggccggcgaacgcgtgctggtcaccacgctcaccaagcgcatggccgagcag
ttgaccgagttcctgtcggagcacggcgtcaaggtccgctacctgcactcggacatcgac
acggtcgagcgcgtggagatcctccgcgacctgcggctgggcaccttcgatgtgctggtc
ggcatcaacctgctgcgcgaggggctggacattcccgaggtgtcgctggtggccattctc
gatgccgacaaggagggcttcctgcgcgccgagcgttcgctgatccagaccatcggccgc
gccgcgcgcaacgtcaacggcaccgccatcctctacgcggaccgcatcaccgactcgatg
cgccgcgccatcggcgagaccgagcggcgccgcgccaagcagatcgcccacaacgaagcc
catggcatcacgccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctac
aacgtcgacgatgcgcgcgctgaactgaaggccgcgcaggaagccgccaggtacgaagac
atgagcgagaagcaggtcggcaaggagatcaagcgcctcgaaaagcagatgctcgatcac
gccaagaacctggagttcgaaaaggcggccgcggtgcgcgaccagctggccaagctcaag
tcgcaggtcttcggggccagcggcgaagaccatatcgcgccggcggcctga
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