Ralstonia pseudosolanacearum FQY_4: F504_2196
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Entry
F504_2196 CDS
T02751
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03420
Nucleotide excision repair
rse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F504_2196
03430 Mismatch repair
F504_2196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rse03400
]
F504_2196
Enzymes [BR:
rse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F504_2196
DNA repair and recombination proteins [BR:
rse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F504_2196
MMR (mismatch excision repair)
Other MMR factors
F504_2196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGH84710
LinkDB
All DBs
Position
complement(2367630..2370119)
Genome browser
AA seq
829 aa
AA seq
DB search
MTGESLELYGLSVAGMGEAGEAAGIISGFRKGSPRMSELLAHLNPEQRAAVTLPDESALI
LAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTFTNKAAKEMTARLSAMLPINTRGMWI
GTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSAVKRLLKSLNIDDEKFPPKNVQYFIN
GAKEQGLRAGDLEIANEFDRRMADLYAAYDAQCQREGVVDFSELLLRCYELLRYNDAIRA
HYQRRFKHILVDEFQDTNRLQYAWLKILAGLGEAGVTPNAIFAVGDDDQSIYAFRGANVG
NMVDFEREFRVAHRIKLEQNYRSHGNILDTANHLIAHNTRRLGKNLRTDAGHGEPVRVYP
SATDGQEAGWIVEEIRERIASGTARSEIAILYRSNAQSRVIEHALFSVGIPYKVYGGLRF
FERAEIKHALAYLQLLENPDNDAAFGRVVNFPARGVGARSLEQLQDAAKLYGVSLAASVP
YLTGAAGTKLAAFVRLIEQMRADTRQMTLPEIVQHVIHASGLITHYQGEKEGLDRIENLQ
ELVTAAQAFVAEEGYGVDAIATALPMRHDAMLRIEGGETDSDAVTELVADETPTEMTPLV
AFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFHVVFITGLEEGLFPHENSLLDTDGL
EEERRLMYVAITRARERLYLSFAQSRVLHGQIRYHIRSRFFDELPEATLKWLTPQHTGYS
PTRRAQGGQGMQGDSAWGREWFKRPERGDNEAYTGRPTGGMDTGNTYADTKRAAGTGFRV
GQSVFHNKFGEGVITTLEGEGADARAHIKFSRHGVKVLALGIAKLDPIN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgaaagcctggaattatacggcctgtcggtggccggcatgggcgaagcgggc
gaggcggccggtataatttccggattccgcaaaggctctccccgcatgtccgaactgctc
gctcacctgaaccccgaacaacgcgccgccgtcacgcttcccgacgagtcggcgctgatc
ctggccggggcgggcagcggcaagacgcgcgtgctgaccacccgcatcgcctggctgatc
cagagcgcccgggtgtcgccgtcgggtgtgctggccgtcacctttaccaacaaggcggcc
aaggagatgaccgcccggctgtccgccatgctgccgatcaacacgcgcggcatgtggatc
ggcaccttccacggcctgtgcaaccggctgctgcgcgcgcactaccgcgacgccgggctg
ccgcagaccttccagatcctcgatacgcaggatcagctctcggccgtcaagcgcctgctc
aagtcgctgaacatcgacgacgagaagtttccgccgaagaacgtccagtacttcatcaat
ggcgccaaggaacagggcctgcgcgcaggcgacctggagatcgccaatgagttcgaccgc
cgcatggccgacctgtacgccgcctacgatgcgcagtgccagcgcgaaggcgtggtcgat
ttttcagagctgctgctgcgctgctatgagctgctgcgttacaacgatgcgatccgcgcg
cactaccagcggcgcttcaagcacatcctggtcgacgagttccaggacaccaaccgcctg
caatacgcctggctgaagatcctggccggcctgggcgaggcgggcgtcacgcccaacgcc
atcttcgccgtgggcgacgacgaccagagcatctacgccttccgcggcgccaacgtcggc
aacatggtggacttcgagcgcgaattccgtgtcgcgcaccgcatcaagctggagcagaac
taccgttcgcacggcaacatcctggacacggccaaccacctgatcgcccacaacacccgc
cgcctgggcaagaacctgcgcaccgacgccggccacggcgagccggtgcgcgtctacccg
tccgccaccgacgggcaggaggccggctggatcgtcgaagaaatccgcgagcgcatcgcc
agcggcacggcgcgttccgagatcgccatcctgtatcgcagcaacgcgcagtcgcgggtg
atcgagcatgcgctgttttcggtgggtattccctacaaggtgtatggcgggctgcgcttc
ttcgagcgcgccgagatcaagcacgcgctggcctacctgcaactgctggagaaccccgac
aacgatgccgccttcggccgcgtggtcaacttcccggcgcgcggcgtcggggcgcggtcg
ctggagcagctgcaggatgcggccaagctgtatggcgtgtcgctggcggcgtcggtgccg
tacctgaccggcgcggcggggacgaagctggcggcgttcgtgcggctgatcgagcagatg
cgcgccgacacgcgccagatgacgctgcccgagatcgtccagcacgtgatccacgccagc
ggcctcatcacgcattaccagggcgagaaggaaggtctcgaccgcatcgagaacctgcag
gaactggtgaccgccgcccaggccttcgtggccgaggagggctacggcgtcgatgccatc
gccaccgcgctgccgatgcgccacgacgcgatgctgcgcatcgagggcggcgagacggac
agcgatgccgtcaccgagctggtcgccgatgaaacgccgacggagatgaccccgctggtc
gccttcctgacgcatgcctcgctggaggccggcgacaaccaggcacaggccggccaggac
gcggtgcaactgatgaccgtgcacgccgccaaggggttggagttccacgttgtcttcatt
accggcctggaggagggcctgttcccgcacgagaacagcctgctggacaccgacggcctg
gaagaagagcgtcgcctgatgtacgtagccatcacccgggcgcgcgagcgcctgtacctg
tcgtttgcacagagccgcgtgctgcacgggcagatccgctaccacattcgctcgcgcttc
ttcgacgagctgccggaagccacgctgaagtggctgacgccgcagcataccggctacagc
cccacgcgtcgcgcgcagggcgggcagggcatgcagggcgatagcgcctggggccgcgag
tggttcaagcgccccgagcgcggcgacaacgaggcctacaccggccgcccgaccggcggc
atggacaccggcaacacctacgccgacaccaagcgcgcggccggaacgggtttccgcgtc
ggccagtcggtgttccacaacaagttcggggaaggcgtcatcacgacgctggaaggcgag
ggcgccgatgcgcgcgcccacatcaagttcagccgccacggcgtgaaggtgctggcgctg
ggcatcgccaagctggacccgatcaactga
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