Runella slithyformis: Runsl_0761
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Entry
Runsl_0761 CDS
T01553
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rsi
Runella slithyformis
Pathway
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Runsl_0761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_0761
Enzymes [BR:
rsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Runsl_0761
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Runsl_0761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
nSTAND3
AAA_30
IstB_IS21
ATPase
PhoH
AAA_19
AAA_16
T2SSE
TsaE
SRP54
HypA
Sigma70_r4
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AEI47201
UniProt:
A0A7U4E473
LinkDB
All DBs
Position
complement(896934..899450)
Genome browser
AA seq
838 aa
AA seq
DB search
MLTAENDDFGLEEITLFADLILPVPVRQLFTYRVPRVFNSAIKNGARVVVPFGKNRVVTG
VVAHIHTTPPSRYQAKYIGELLDDEPLVTPYQIALFNWIADYYLCSVGEVLNVALPSGLK
ITSQSKIQYNPDFDYFDLLTEEETALLEEIKKYQSLTYEEVGKRVGDQNINHVIKSLIGK
RAVILYEEVREKYKPKIQKKVKLTGRYETRENLMELIGQLDKMPKQQEVVMRYMSQVPLQ
NDPYANRAGLEKSYFTQNEDISDSALSTLIKKGVFEEFEVTVSRFAEVKPDFTAGINIKL
TTAQQRAFDEIINLFQEKDTVLLHGVTGSGKTEVYIHLAQQVLESGSQVLFLLPEIALTT
QIVVRLKKVFGDKLGIYHSKFSDNERVEVWKGVVSGQYQLVVGVRSAIFLPFDALGLIIV
DEEHESSYKQYDPAPRYHARDVSIVAAQHQHAKVLLGSATPALESYYQALNGRYGLVKLT
ERFGKASMPEFVLIDTKQERKTKKMKYEFSSVLVEELRETLARNEQSIIFQNRRGYSSYL
QCEECGWIGECENCAVSLTYHQKDAELRCHYCGHKEEVPKLCPGCGSTKVRTVGFGTEKL
EDQLKIFFPTARVARMDLDTTRAKNAYKEMIEDIEQGNVDILVGTQMISKGLDFENVSMV
GIFDADRMIHFPDLRSTERAFQLITQVSGRAGRRADRKGRVLIQTGNTNQKILQKIIAND
YEGMYTEEIAEREQFRYPPFTRLIKLTVKHLEQDMARRAAEKLTHLLMEKMGEDRVLGPQ
PPLVERIRNRFLFDILIKLEREKVNFKAAKTFILEKVTDILTDKTLKGADVTIDVDCL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
gtgttaactgcagaaaacgacgattttggtttagaagaaataaccctgtttgcggattta
attttgccggttcccgtcaggcagttgtttacataccgcgtaccgcgggtgtttaactct
gccatcaaaaatggtgccagagtggtcgttccttttggtaaaaaccgtgttgtaacgggt
gtagtggcacatattcataccacgcctccttctcgatatcaagccaaatacatcggcgaa
ctgctggacgatgagcccttggtaaccccctatcaaattgctctttttaactggatcgcc
gactattatctgtgcagtgtaggggaggtgctgaacgtcgccttgccgtcgggcctgaag
atcaccagccaatccaagattcaatacaatcctgacttcgattattttgatcttttgacc
gaagaggaaactgccctgctggaagaaatcaaaaaataccagtcgctgacgtacgaagag
gtcggaaagcgagtcggggatcagaacattaatcatgtcattaaatcgttgatcggcaag
cgggcggtaattctgtatgaagaagtccgtgaaaaatacaaacccaaaattcagaaaaaa
gtaaaactcacgggacgctacgaaacccgcgaaaatctgatggagttgatcggtcaactt
gataaaatgcctaagcagcaggaagtggtcatgcggtacatgagtcaggtgccgctgcaa
aatgacccttacgccaaccgtgccggcttggaaaaaagttattttacccaaaatgaagac
atttccgactccgccttgagtaccctcattaagaaaggtgtttttgaagaatttgaggta
acggtgtctcgatttgccgaagtaaaacccgactttaccgcaggaattaatatcaaactg
accactgcgcagcaacgcgcgtttgacgaaattatcaatttatttcaggaaaaagatacg
gtattgctgcacggagtcaccggcagcggtaaaacggaagtatatattcatctggcccag
caggtactggaaagcggctctcaggtactattcctacttcccgaaattgctcttacgacc
caaatcgtggttcgtttgaaaaaagtcttcggtgacaagctcggtatttatcactctaaa
ttttctgacaatgagcgggtagaggtttggaaaggggtcgtttcgggtcaatatcagttg
gtggtgggcgtgcgatcggctatttttctgccattcgatgcccttggattgatcattgtc
gatgaagagcacgaaagctcttataaacaatacgaccctgcccctcgctaccacgcgcgc
gatgtgtcgattgtggcagcgcagcaccagcacgccaaagtattactgggctcagccacg
ccggcgctggagtcctactatcaggccctgaacggtcgctacggactggtgaaactgacg
gagcgtttcggcaaagccagtatgccggagtttgtgttgatcgataccaaacaggagcgt
aaaaccaagaagatgaagtatgagttttcgtcggttttggtggaagagctgcgtgaaaca
ttggcccggaatgaacaaagcatcatctttcaaaaccgtcgcggttattcttcgtactta
caatgtgaagaatgcggatggatcggcgagtgtgaaaactgtgccgtaagcctgacctat
caccaaaaagacgcagagctgcggtgccattattgcggacataaagaagaggtgccgaag
ctttgtcccgggtgcggttctaccaaagtacgaaccgtcggatttggcaccgaaaagctg
gaagaccaactcaagatattcttcccaacggcccgggtggcacggatggatctggataca
acccgcgccaagaatgcttataaagaaatgatcgaagacattgagcaggggaatgtagat
atcctggtcgggacgcagatgatcagcaaagggcttgattttgaaaatgtaagtatggtc
ggcatctttgatgccgaccgcatgattcattttcccgatttgcgctcaacggaaagggcg
tttcagctcattacccaagtcagcggtagggcaggacgccgtgccgaccgaaaaggacgg
gtattgatccagaccggaaatacaaatcaaaagattttacaaaaaattattgcgaacgat
tatgaaggaatgtacacggaagaaattgccgaacgggagcaatttagataccccccgttc
acgaggcttataaaattgacagtcaaacacttagagcaggatatggctcgccgggcggcc
gagaaattaacccatttattgatggagaaaatgggggaagaccgggtgctcggaccgcag
cctccgctggtcgaacgcatccgaaatcggtttttgtttgacattcttataaaactcgag
cgcgaaaaagttaattttaaggccgcaaagacttttatcctcgaaaaagtgacggatatt
ctgaccgataaaacattaaaaggggctgatgtaaccattgatgtagattgcctctaa
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