Runella slithyformis: Runsl_5717
Help
Entry
Runsl_5717 CDS
T01553
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
Organism
rsi
Runella slithyformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS
PAS_4
HATPase_c
PAS_8
HisKA
DUF1949
Motif
Other DBs
NCBI-ProteinID:
AEI52002
UniProt:
A0A7U3ZRF7
LinkDB
All DBs
Position
pRUNSL01:complement(75955..78996)
Genome browser
AA seq
1013 aa
AA seq
DB search
MKVIDCDLSNEKELAGLFMGRPVKSSEGQVDDICIYWQKPHSKPLSELPGLRLGTYLGDP
NVCGIRLPALFWPMLQAEGTITCDLTIDAMRFELQVAAVEEHYIISIQRILTNVVQKEPI
QATMYNDFFTNADVGIVFMDRNGLIKEVNPALEKMTGYKAEELVNTVTATTLRVPEVHQR
QMTELLPFISDKSLTGEKIILAYLEEKGILKRENTLLRKDGGQLPILSTVTKVFNRTGGC
LGFVNYLFDISELKQTQAGLFKANERLTLATQAGKVGIWEFNTLTKEYTWDEETYKIHGV
SPKEPAALTMSYFLSLVHPQDRDYILSKSKEVDEKEFDLEPIRIIRPDGKLRYIKYSGRR
LYNNQATLADVIGVVMDVTDRHLAQLALTQSEKMYRFLVNNLKAAIFEMDLQGNLIYLNS
FWKEMTGFETEPALGTNCMEFIHPEDRPINSERFSSLMSRKTTEVRHEIRHRTQDGGYRW
VELFAKLTLDETGQPNGSIGTLYDISDRKRIEEVLSESEKRFKAIFNSTFQYMALTDTAG
NILEVNQSSLKAGGDTYEEVAGKPFWKMNTFKLSPHTQEQLLHFFHSAANGQAVHREVEI
YNETQQCHTVDFSIKPIRNDQGAIVSLLTEGRNITQEKNAKQALLESEQRFREIAENVDE
IFWSRAGDEAKFLYINPAYERITGQTCQQLYDDPTSLLEIVAEEDRPALQRLLTANVSED
YSTELRLKVKDGSFHWFRARIFIIRDEKGNVRRKVGIAGDITLQKEKEMLLTKSLEKEKE
LNMLKSQFVSYVSHEFRTPLTVVQSSIELVQHYLFNANGSNLNEQYASKIKHHFSVINNK
IQYFTNLLTDILTLQQIEIGKISFFPQPTDIVILATDVLNEFFADRPDERFAELRTEGTP
RPIMLDEKLITRILINLLSNAFKFSNTNPRLCLVFQEQQLKIEIIDGGIGIPAEDIPRLF
TTFFRAGNVDGIGGTGLGLQISKQLVELHGGYIEVDSCENKGTTMTIVIPSLH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaattgattgcgacctatcaaacgaaaaagaattggcaggtctattcatgggg
cgacccgtaaagagcagcgaaggacaggttgacgacatctgcatctattggcaaaagccc
cacagtaaacccctgagtgaattaccggggcttagactcggcacataccttggtgacccg
aatgtctgcggtattcgtctgcccgcgcttttttggcccatgcttcaggcagaagggact
atcacctgcgaccttaccattgacgccatgaggtttgaattacaggtggctgccgtagag
gaacattatatcatttcgatacagcgcatcttgacgaacgttgtacaaaaagagcctatt
caagctacaatgtataacgatttctttaccaatgccgatgtagggattgtatttatggat
cgaaatggacttataaaagaagtcaatccggcactggaaaaaatgaccggctataaggca
gaagagctggtcaataccgtcacggcaacgacattgagggttcctgaggttcatcagcgt
caaatgactgaattgcttccttttatttcagataaatcgctgacgggcgaaaaaattatt
ctggcgtatctggaggaaaaaggtattctgaaaagagaaaatacccttctgcgcaaagac
gggggccaattacctatattgtcgaccgttaccaaagtatttaacagaaccggtgggtgt
ttgggatttgtgaattacctttttgatatttcagaacttaaacagacgcaggccggcctg
tttaaagccaacgagcgtcttacattggccactcaggcaggaaaagtgggtatatgggag
ttcaatactttgaccaaagaatatacatgggacgaagaaacctataaaatccacggcgta
tcccccaaggagcctgcggcgctgaccatgtcctattttttgtcattagtgcacccacag
gacagggattatattctttcaaaaagtaaggaggtagacgaaaaggaatttgatctggaa
cctatccgcattatcaggcccgacggtaaactccgatacatcaaatacagtggccgaagg
ctgtacaataatcaggctaccctggcagatgtgattggggttgtcatggatgtcacagac
cgtcatttagcacaactggccctgacccaaagcgagaaaatgtatcgttttttggttaat
aatcttaaagccgccatttttgaaatggaccttcagggaaatttgatctatctgaattcc
ttctggaaggaaatgaccggctttgagacagagcccgccttgggaaccaactgcatggaa
ttcattcaccccgaagaccggccgataaacagtgaacggttttcctcattaatgagtcga
aaaaccacagaggtccgtcatgagatcaggcaccgtacacaggacggcggttatcgatgg
gtggagctttttgcaaaattgaccctggatgaaacggggcaacccaacggaagtatcgga
acactctatgacatcagcgaccgcaaaaggatcgaagaagtattgtcggaaagcgaaaaa
cgctttaaagcgatttttaattctaccttccagtacatggccctgaccgatacggcagga
aatatactggaagttaaccaaagctctttgaaagccggcggagatacctacgaagaggta
gcaggaaaacctttttggaaaatgaacacttttaaactgtcaccgcacacccaagagcaa
cttctgcatttttttcactcggccgccaacggacaagccgttcaccgcgaagtggaaata
tataatgaaactcaacagtgtcataccgttgacttctcaataaaacccatccgaaatgat
cagggagcgattgtctctttgcttacggaagggcgcaacattacacaggaaaaaaacgca
aaacaggccttgctggaaagcgaacagcgatttagggaaattgccgaaaacgtcgatgaa
attttttggagccgcgccggtgatgaggcgaagttcctttatatcaatccggcctatgaa
cgcattacgggccaaacctgtcagcaactttatgacgatccgacctctttgttagagatt
gtagcggaggaagaccggccggcactacaacgattattgacggctaatgtatcggaggat
tattcaaccgaattacggctaaaggtaaaagacggttcctttcattggtttagggcgcgt
atttttatcataagagatgaaaagggcaacgtgcgaagaaaagtgggcattgcaggggat
attacccttcaaaaagaaaaggaaatgcttctgacgaaatcgttggaaaaagagaaggaa
ttaaatatgcttaaatcgcagtttgtctcgtatgtatctcacgaattcaggaccccgctg
accgtggtgcaatccagtattgaattagtgcagcattatctgttcaacgccaacggcagt
aatcttaatgagcaatacgcctccaaaattaaacatcacttttcggtcataaacaataaa
attcaatatttcaccaacttattgacggatattctgacgctgcagcaaattgaaatcgga
aaaatatccttcttccctcaacctactgatattgtgatattggcgactgacgtactgaat
gagtttttcgccgaccgtccggacgaacgctttgcagaactgcgcacagaagggacaccg
cgccccattatgctggatgaaaaactaatcacccgtattttgatcaatctgctttccaac
gcctttaaattttctaataccaaccccaggctttgcctggtatttcaggaacaacagtta
aaaattgagatcattgatggcggtatcggtattccggcagaagatattccgcgacttttt
accaccttttttcgcgccggcaatgttgacggcataggcggtacaggtctgggtctgcag
atctcaaaacagcttgttgaactgcacggtgggtatattgaagtcgatagttgcgaaaat
aaaggaacaaccatgacgattgtcattccgtccttacattag
DBGET
integrated database retrieval system
