Cereibacter sphaeroides KD131: RSKD131_0152
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Entry
RSKD131_0152 CDS
T00844
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSKD131_0152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_0152
Enzymes [BR:
rsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RSKD131_0152
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RSKD131_0152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Apolipoprotein
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
ACM00012
UniProt:
B9KM14
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All DBs
Position
1:complement(146842..148401)
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AA seq
519 aa
AA seq
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MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEIGRVSRPASGHLYFDLKD
DRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMAM
LEKRRAALAAEGLFDAARKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWPV
AVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAES
RIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAET
IRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLRP
RLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFEALSARLAPAFARLIAETERATRR
DAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVRADGAVVTTK
AEAGTAAVLEIEFQDGRLSVGRGKTRKPKEEPPAQGSLL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctcttcgaagatcccgcccccagccgcaacacgccggaattcaccgtctcg
gagctgtcgggcgccgtgaagcgcgtcatcgagggcgagttcggcctcgtccgggtccgc
ggcgagatcgggcgcgtctcgcggcccgcctcggggcatctctatttcgacctgaaggac
gaccgcgccgtgatggcggcgatctgctggaaggggcaggccggccggctctccgtgcgt
cccgaggaggggatggaggtggtggccaccggccggatgaccaccttccccggccagtcg
aaatatcagatcatcgtcgaggacatggcccccgcaggcgcaggcgcactgatggccatg
ctcgagaagcgccgtgcggcgctggccgcggaggggctgttcgacgccgcccgcaagcgc
cccctcccctacctgccgcgggtgatcggcgtcgtgacctcgccgtcgggcgcggtgatc
cgcgacatcctccaccggctgcgcgaccgcttcccgagccatgtgctgatctggcccgtg
gcggtgcagggcgagaaatgcgcgcccgaggtggccgccgccatccgcggcttcaatgcc
ctgcccgaggggggcccgatcccgcgtcccgacctcctgatcgtcgcgcgcggcggcggc
agcctcgaggatctctggggcttcaacgaggagatcgtcgtccgggccgcggccgagagc
cggatcccgctgatctcggccgtgggccacgagaccgacaccacgctcatcgaccatgcc
gccgaccgccgtgcccccacccccaccgccgcggccgagatggcggtgcccgtgcggctc
gagctgctcgccggcctcgacggtcagggcgcgcggctctcgcgctgtgcggccgagacc
atccggcggcgcgaccagcgcctgcgcgatctcgcccgcgccctgccgcggctcgagagc
ctcgtggcgggaccgagccagcgcttcgacctctggtcgggccggctttcgggtgcgctc
ggccagagcgttgccgcccgccgggcccggctcgagccgctcggcgcgcatctgcggccg
cggctcctcgccgatctggtggcgcggcagaaggaccggctgggcgaccggacgcgcagc
ctcgagacctgcctcggacggcgcgccgagcgcgcccgggaccggttcgaagccctctcg
gcccgcctcgctccggccttcgcgcggctcatcgccgagaccgagcgcgcgacccggcgc
gacgcggccacgctcggcacgctcgcggcccggctcgacgcggcccccgaggcgcggctc
gcccgcctgtcggaccggctcgaggcgctcgaccgcctgcgccagacgctgggctaccgc
gagacgctgaagcgcggctatgcggtggtgcgggcggacggcgccgtggtcacgacgaag
gccgaagccggaaccgccgccgtgctcgagatcgagttccaggacggccgcctgtccgtg
ggccgcggcaagacccgcaagccaaaggaagagccgcccgcgcagggcagcctgctctga
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