Cereibacter sphaeroides KD131: RSKD131_1736
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Entry
RSKD131_1736 CDS
T00844
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03410
Base excision repair
rsk03430
Mismatch repair
rsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSKD131_1736
03430 Mismatch repair
RSKD131_1736
03440 Homologous recombination
RSKD131_1736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_1736
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RSKD131_1736
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RSKD131_1736
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RSKD131_1736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
ACM01596
UniProt:
B9KKE9
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All DBs
Position
1:1769523..1771274
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AA seq
583 aa
AA seq
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MTGPAARAFLGVEASATGRRWVGPSPEEDRLAEAMAQTTRLPLALCRTLVRRGVPASDAE
SFLAPALRDLLPDPLTLKDMAPAAARLLQAVARRERIAIFADYDVDGGSSAALLIVWLRA
LGRTATLYIPDRIDEGYGPNVPAMQALAEAHDLILCVDCGTLSHEPIAAAKGADVVVLDH
HLGAETLPPALAVVNPNRQDEDGSLGHLCAASVVFLLLVEANRRLRAEGVQGPDLMAMLD
LVALATVADVAPLTGVNRALVRQGLKVMARRERPGLVALADVARMKTAPNGYALGFLLGP
RVNAGGRIGQADLGARLLSTEDPREAQALAERLDQLNTERREIEARVREEALAQAEARGI
SGPLVWAAAEGWHPGVVGIVAARLKEATNRPAVVIGFENGIGKGSGRSIAGVDLGASIHR
VAHEGLLLKGGGHRMAAGLTVEEGRLEAAMERLGELLARQGAAEAGPADLRLDGLLMPSA
ATAEFVEQIDSAGPYGAGAAAPRFALADQRVTCRRMGDKHMRLTIGGAEGRLEAVAFGCF
DGPLGPLLEGGGAGRFHLAGRLEIDTWGGSARVQMRLEDAARA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcccggcggcgcgcgccttcctgggggtcgaggcctccgcgaccgggcgccgc
tgggttggcccctcccccgaggaggaccggctggccgaggcgatggcgcagaccacgcgc
ctgccgctcgcgctctgccgcacgctggtgcggcggggcgtcccggcctccgatgccgag
agcttcctcgcgcccgcgctgcgcgacctcctgcccgacccgctgacgctgaaggacatg
gcgcccgccgccgcgcggctgctgcaggccgtggcccggcgcgagcggatcgcgatcttc
gccgactacgacgtggacggcggctcctccgccgcgctgctgatcgtctggctccgggcg
ctcgggcgcacggccacgctctacatccccgaccggatcgacgagggctacggcccgaac
gtgcccgccatgcaggcgctggccgaggcgcatgacctgatcctctgcgtcgattgcggc
accctctcgcacgagcccatcgcggcggcgaagggcgcggatgtggtggtgctcgatcac
cacctcggcgccgagacgctgccgcccgcgctcgccgtggtgaaccccaaccggcaggac
gaggacggcagcctgggccatctctgtgcggcctccgtcgtgttcctgcttctcgtcgag
gccaaccgccgcctgcgcgcggaaggggtgcaggggccggacctgatggcgatgctcgac
ctcgtggcgctggcgaccgtggccgatgtcgcgccgttgacaggtgtcaaccgcgcgctc
gtgcggcagggcctcaaggtcatggcgcggcgcgagcggccgggtctggtggcgctggcc
gatgtggcgcggatgaagaccgcgcccaacggctatgcgctggggttcctgctcggcccg
cgcgtcaatgcgggcgggcggatcgggcaggcggatctcggcgcgcggctgctgtccacc
gaggatccgcgcgaggcgcaggccttggccgagcggctcgaccagctcaacaccgagcgg
cgcgagatcgaggcccgcgtccgcgaggaggctctggcccaggccgaggcgcgcggcatc
tcgggcccgctcgtctgggccgcggccgagggctggcatcccggcgtggtgggcatcgtg
gccgcccggctgaaggaggccaccaaccgccccgccgtcgtgatcggcttcgagaacggg
atcggcaagggctcgggccgctcgatcgccggtgtggatctgggcgcttccatccaccgc
gtggcgcatgaggggctgcttctgaagggcggcggacaccggatggctgcgggcctcacc
gtcgaagaaggccgcctcgaggccgcgatggagcggctgggcgagcttctggcgcggcag
ggggcggccgaggccggtccggcggacctgcggctcgacgggctcctgatgccctcggcg
gcgacggcggaattcgtcgagcagatcgactccgcgggcccatacggggcgggcgccgcc
gcgccgcgcttcgccctggcagatcagcgcgtgacctgccggcgcatgggcgacaagcac
atgcggctgacgatcggcggcgccgagggccggctcgaggcggtggccttcggctgcttc
gacggcccgctcggcccgcttctggaaggcggcggcgcaggccgcttccacctcgccggc
cggctcgagatcgacacctggggcggcagcgcccgcgtgcagatgcgcctcgaagacgcg
gcgcgcgcatga
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