Ralstonia pseudosolanacearum GMI1000: RSc2067
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Entry
RSc2067 CDS
T00071
Symbol
pnp
Name
(GenBank) probable polyribonucleotide nucleotidyltransferase protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSc2067 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rso03019
]
RSc2067 (pnp)
03016 Transfer RNA biogenesis [BR:
rso03016
]
RSc2067 (pnp)
Enzymes [BR:
rso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RSc2067 (pnp)
Messenger RNA biogenesis [BR:
rso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RSc2067 (pnp)
Transfer RNA biogenesis [BR:
rso03016
]
Prokaryotic type
tRNA degradation factors
RSc2067 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
KhpA-B_KH
Phage_tube
DUF5813
Motif
Other DBs
NCBI-ProteinID:
CAD15774
UniProt:
Q8XXP6
LinkDB
All DBs
Position
complement(2239684..2241837)
Genome browser
AA seq
717 aa
AA seq
DB search
MFNKIVKEFQWGNHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSI
NPEVPADIPALVAASAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLVVA
GTERAVLMVESEANQLSEEVMLGAVVYGHEQMQIAINAIHDLVRDGGKPEWDWQAAPKNE
ALVAKVSELGLADLQAAYQLRQKSARSQKLKEVYASVAAKLAEAGVEADGVEVDNILFEL
ESKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGTKS
DEQIIDALQGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKEDE
FAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVLTD
ILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQAA
MGHARTELSEHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIQEDGTITIAST
SSEGMAEAKRRIEGITAEAEVGKIYSGTVLKLLDFGAIVNILPGKDGLLHISEIANERVN
QVSDYVKEGQMVRVKLLSTDEKGRMRLSIKAAKAEEGDVPATAPQAPGAGDATSQQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcgtcaaggaattccagtggggcaaccacaaggtgcgcatggagacg
ggcgagatcgctcgccaggccagcggcgccgtgctgctcgacatggacgacaccgtggtg
ctggccaccgtggtgggcgccaagaacgccaagccgggccaggatttcttcccgctgacc
gtcgactacatcgagaagacctacgccgccggcaagatcccgggtggcttcttcaagcgt
gaaggccgtccgtcggaaaacgagacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtcgtcatccacgtgctgtcgatc
aacccggaagtgccggccgacatcccggcgctggtggccgcttcggccgcgctggccgtg
tcgggcctgccgttcaacggcccggtgggcgccgcccgcgtgggttacaaggacggccag
tacctgctgaacccgaaccgcgcgcaactggcgcattcggacctggacctggtggttgcc
ggcaccgagcgtgccgtgctgatggtcgaatccgaagccaaccagctgtcggaagaggtg
atgctgggcgccgtggtgtacggccatgagcagatgcagatcgccatcaatgcgatccac
gacctggtgcgcgacggcggcaagccggagtgggactggcaagcggcgccgaagaacgaa
gccctggtcgccaaggtgtccgagctgggcttggccgatctgcaagccgcttaccagctg
cgccagaagtcggcccgcagccagaagctgaaggaagtctacgcatcggtcgcggccaag
ctggccgaagccggcgtggaagccgacggcgtggaagtcgacaacatcctgttcgagctc
gaatcgaagatcgtgcgcggccagatcctgaacggcgagccgcgtatcgacggtcgcgac
acccgcacggtgcgcccgatcgagatccgctcgtcggtgctgccgcgcgcgcacggctcg
gcgctgttcacgcgcggtgagacgcaagcgctggtggtggccaccctgggcaccaagagc
gacgagcagatcatcgacgcgctgcagggcgagtaccgcgaccgcttcatgctccactac
aacatgccgccgttcgccaccggcgaaaccggccgcgtgggcagcccgaagcgccgcgaa
atcggccacggccgcctggccaagcgcgcgctgatcccggtgctgccgaaggaagacgaa
ttcgcctacacgattcgtctggtgtcggagatcaccgagtcgaacggctcgtcgtcgatg
gcttcggtctgcggtggctgcctggcgctgatggatgccggcgtgccggtcaaggcgcac
gtggccggcgtggccatgggcctgatcctggagggcaacaagttcgccgtgctgaccgac
atcctgggcgacgaagatcacctgggtgacatggacttcaaggtggccggtaccgataac
ggcatcaccgcgctgcagatggacatcaaggtgcagggcatcaccaaggaaatcatgcag
gtcgctctggcgcaggccaaggaaggccgtctgcatatcctgggcaagatgcaggccgcg
atgggccatgcacgcaccgaactgtcggagcatgcgccgcgcatgatcaccgtcaagatc
aatccggagaagatccgcgacgtgatcggcaagggcggctcgaccatccaggcgctgacc
aaggaaaccggctgcacgatcgacatccaggaagacggcacgatcaccatcgcgtcgacc
tcgtccgagggcatggccgaagccaagcgccgcatcgaaggcatcacggccgaagccgaa
gtgggcaagatctacagcggcaccgtgctcaagctgctggacttcggtgcgatcgtcaac
atcctgccgggcaaggacggcctgctgcacatctcggagatcgccaacgagcgcgtcaac
caggtgtcggactacgtcaaggaaggccagatggtgcgcgtgaagctgctgagcaccgac
gaaaagggccgcatgcgcctgtcgatcaaggccgccaaggctgaggaaggcgatgtgccg
gccaccgcgccgcaggcgccgggcgccggcgacgcgacgtcgcagcagcagtaa
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