Ralstonia pseudosolanacearum GMI1000: RSp1620
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Entry
RSp1620 CDS
T00071
Name
(GenBank) putative surface-exposed adhesin protein
KO
K21449
trimeric autotransporter adhesin
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rso02000
]
RSp1620
Transporters [BR:
rso02000
]
Other transporters
Pores ion channels [TC:
1
]
RSp1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
YadA_head
HAP1_N
Laminin_II
Baculo_PEP_C
BORCS7
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
CAD18771
UniProt:
Q8XPL8
LinkDB
All DBs
Position
megaplasmid:complement(2036953..2040882)
Genome browser
AA seq
1309 aa
AA seq
DB search
MVFSAMPQYACAEMLLQNDPGTNCGSVGDAYAWARGDGYSGCKVGYEAAKNLAKGTAFGN
SLGQLSPGTNILVYGSTLRAGMNDEVTPLDSMNIGGHLDVWGASGFHGGVDMNNSAIKNL
ADGTLSATSTEAVTGRQLNATNTNITNLQNSIKSISSSASLVQQSAAGKDITVAKDLDGD
AVDFSGKKLSDSTTFSRKLTGVAEGTLSATSTDAVSGKQLYTTNQNLSTTNQNLADTNKS
LAETNKNVSATTTNITNLQNTIKNISGGSAGLVQQSAAGKDITVAKDLDGEAVDFSGKKL
SDSTTFSRKLTGVAEGTLSATSTDAVSGKQLYTTNQNLASTNKDLANTNTRLTTAEGNLS
SNTTSITNLQNTIKNISGGSAGLVQQSAAGKDITVAKDLDGDAVDFSGKKLSDSTTFSRK
LTGVAEGTLSATSTDAVSGRQLYTTNQNLSTTNQNLADTNKSLAETNKNVSATTTNITNL
QNTVNNISSGSAGLVQQSAAGKDITVAKDLDGDAVDFSGKKLSDSTTFSRKLTGVAEGTL
SATSTDAVSGKQLYTTNQNLSTTNQNLADTNKSLAETNKNVSATTTNITNLQNTVNNISS
GSAGLVQQSAAGKDITVAKNLDGDAVDFSGKKLSDSTTFSRKLTGVAEGTLSATSTDAVS
GKQLYTTNQNLASTNKDLANTNTRLTTAEGNLSSNTTSITNLQNTIKNISGGSAGLVQQS
AAGKDITVAKDLDGDAVDFSGKNLSDSTTFSRKLTGVAEGTLSATSTDAVSGKQLYTTNQ
NLSTTNQNLADTNKSLAKTNNNVSATTTNITNLQNTVNNISSGSAGLVQQSAAGKDITVA
KDLDGDAVDFSGKKLSDSTTFSRKLTGVAEGTLSATSTDAVSGKQLYATNQNVSKLSANV
TDVSDSVTNIKNTMNTIVNGGGLKYFHANSTLDDAQAMGLESIAFGGAAVAAGMNSMAMG
GNARAVAGNAVALGAGSVADRANTVSVGSAGKERQITNVAAGTADTDAVNVAQLKAAGII
NGSGRTNATVTYGTNADGSADYGNVTLGGGNAPAGTAIHNVAAGTAETDAVNVRQMNAAI
ASVQKVSNTNDPMFAADGDRAVKRASAKGTHATAMGAAASAGGDQSVATGHNAQSGGDSS
VAMGANAKATANHAVAVGSGSVANRANTMSVGSAGSERQITNVAAGVQGTDAVNVSQLSQ
AVYAAVGDLPAGTTARQYTDEQIGMVRQGISQVARGAYSGIAAATALTMIPDVDQGKSIA
IGIGSATYKGYQAVALGASARISHNLKAKMGVGYSSEGTTVGMGASYQW
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
gtggttttcagcgccatgccgcaatacgcttgcgcagaaatgttgctgcaaaacgatccg
ggaacgaattgtggaagcgtgggtgatgcatatgcctgggcgcgaggcgatgggtattcg
ggttgtaaggtcggttacgaagccgcaaaaaatttggcaaagggcacagcattcggcaat
agcctgggtcaactatcgcctggtacgaacattctcgtctacgggtcgacgctccgtgct
ggtatgaatgacgaagtgacacccctcgattcgatgaatatcggtggccatctcgacgta
tggggagccagcggctttcacggcggtgtcgatatgaataattccgccatcaaaaacctt
gctgacggcacgctgtcggccaccagcaccgaggcggtgactggcaggcaactgaacgcc
accaacacgaacatcaccaatctgcagaacagcatcaagagcatcagcagttcggcgagc
ctggtgcagcagtcggccgcgggcaaggacatcacagtggccaaggacctggacggtgac
gcggtggacttcagcggcaagaagctgagtgacagcacgacgttttcgcgcaagctgacg
ggtgtggcggaggggacgttgtcggcgacgagcacggatgcggtgagcggcaagcaactc
tatacgaccaaccagaacctgagcacgaccaaccagaatctggcggacacgaacaagagc
ctggccgagacgaacaagaacgtgtcggcgaccacgaccaacatcacgaacctgcagaac
accatcaagaacatcagcggcggctcggcgggtctggtgcagcaatcggccgcgggcaag
gacatcacggtggccaaggacctggacggtgaggcggtggacttcagcggcaagaagctg
agcgacagcacgacgttctcgcgcaagctgacgggtgtggcggaggggacgctgtcggcg
acgagcacggatgcggtgagcggcaagcagctctatacgacgaaccagaatctggcgagt
accaacaaggacctggccaataccaacacgcgcctgacgacggccgagggcaatctgtcg
tcgaacacgacgagcatcacgaacctgcagaacaccatcaagaacatcagcggcggctcg
gcgggtctggtgcagcaatcggctgcgggcaaggacatcaccgtggccaaggacctggac
ggtgacgcggtggacttcagcggcaagaagctgagcgacagcacgacgttctcgcgcaag
ctgacgggtgttgcggaggggacgttgtcggcgacgagtaccgatgcggtgagcggcagg
cagctctatacgaccaaccagaacctgagcacgacgaaccagaatctggcggacacgaac
aagagcctggccgagacgaacaagaacgtgtcggcgaccacgaccaacatcacgaacctg
cagaacacggtgaacaacatcagcagcggttcggcgggtctggtgcagcaatcggcagcg
ggcaaggacatcacagtggccaaggacctggacggtgacgcggtggacttcagcggcaag
aagctgagtgacagcacgacgttctcgcgcaagctgacgggtgtggcggaggggacgctg
tcggcgacgagcacggatgcggtgagcggcaagcagctctatacgaccaaccagaacctg
agcacgaccaaccagaatctggcggacacgaacaagagcctggccgagacgaacaagaac
gtgtcggcgaccacgaccaacatcacgaacctgcagaacacggtgaacaacatcagcagc
ggttcggcgggtctggtgcagcagtcggccgcgggcaaggacatcacggtggccaagaac
ctggacggtgacgcggtggacttcagcggcaagaagctgagtgacagcacgacgttttcg
cgcaagctgacgggtgtggcggaggggacgctgtcggcgacgagcacggatgcggtgagc
ggcaagcagctctatacgaccaaccagaatctggcgagtaccaacaaggacctggccaat
accaacacgcgcctgacgacggccgagggcaatctgtcgtcgaacacgacgagcatcacg
aacctgcagaacaccatcaagaacatcagcggcggctcggcgggtctggtgcagcaatcg
gctgcgggcaaggacatcaccgtggccaaggacctggacggtgacgcggtggacttcagc
ggcaagaacctgagcgacagcacgacgttctcgcgcaagctgacgggtgttgcggagggg
acgttgtcggcgacgagtaccgatgcggtgagcggcaagcagctctatacgaccaaccag
aacctgagcacgacgaaccagaatctggcggacacgaacaagagcctggccaagacgaac
aacaacgtgtcggcgaccacgaccaacatcacgaacctgcagaacacggtgaacaacatc
agcagcggttcggcgggtctggtgcagcagtcggcagcgggcaaggacattacggtggcc
aaggacctggacggtgacgcggtggacttcagcggcaagaagctgagcgacagcacgacg
ttctcgcgcaagctgacgggtgtggcggaggggacgctgtcggcgacgagcacggatgcg
gtgagcggcaagcagctctatgcgacgaaccagaatgtgtcgaagttgtcggcgaacgtc
acggacgtgagtgatagcgtcaccaacatcaagaacacgatgaacaccatcgtgaacggc
ggcgggctcaagtacttccacgcgaactcgacgctggacgatgcgcaggcgatgggcctc
gagtcgatcgcgttcggcggcgcagccgtcgcggccggtatgaactcgatggcgatgggc
ggcaatgcccgggcggtggcgggcaacgctgtggccttgggcgcgggttcggtggcggac
cgcgcgaacacggtgtcggtgggctcggcgggcaaggagcgccagatcaccaacgtggcg
gccggtacggcggacacggatgccgtgaacgttgcccagctgaaggcggccggcatcatc
aacggcagcggcaggaccaacgccacggtgacgtacggcaccaacgcagacggctcggcg
gactacggcaacgtgacgctgggcggcggcaacgcgccggccggcacggcgatccacaac
gtcgcggccggcacggccgagaccgacgcggtgaacgtcaggcagatgaacgcggccatt
gccagcgtgcagaaggtgagcaacaccaacgacccgatgttcgcggcggatggcgaccgc
gctgtcaagcgcgcgagcgccaagggcacgcatgccacggcgatgggtgccgcggccagc
gcgggcggcgaccagtcggtcgcgacgggccacaacgcgcagtcgggcggcgacagctcg
gtcgcgatgggcgcgaatgcgaaggcgacggcgaatcatgcggttgccgtgggctcgggt
tcggtagcgaaccgcgcgaacacgatgtcggtgggctcggcgggcagcgagcgccagatc
accaatgttgcggccggtgtgcagggtaccgatgcggtcaacgtgagccagctgagccag
gcggtctatgcggccgtcggcgatctgccggcgggcacgacggccaggcagtacacggat
gagcagatcggcatggtgcggcaggggatcagccaggtggcgcgcggcgcttacagcggt
atcgcggcggcgaccgcgctgacgatgattccggacgtcgatcagggcaagtcgatcgcg
atcggtatcggcagcgcgacctacaagggctatcaggcggttgcgctgggcgcctcggca
cgcatctcgcacaacctgaaggccaagatgggcgtgggctacagcagcgaaggcacgacg
gtcggcatgggcgcgtcgtatcagtggtaa
DBGET
integrated database retrieval system