Cereibacter sphaeroides ATCC 17025: Rsph17025_4178
Help
Entry
Rsph17025_4178 CDS
T00512
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rsq
Cereibacter sphaeroides ATCC 17025
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
EAL
HisKA_7TM
PAS
PAS_4
PAS_9
PAS_8
GAF
PAS_3
GAF_2
PAS_10
AAA_lid_4
Motif
Other DBs
NCBI-ProteinID:
ABP73029
UniProt:
A4X065
LinkDB
All DBs
Position
pRSPA02:222695..227128
Genome browser
AA seq
1477 aa
AA seq
DB search
MDALSCFTSLSLDSAVYATVATLAGFVLLVSWTLRQDHFFGRRHFLACLFGMIWWLGAAS
LELATPTLACKLAFASAAWPAITLVPICWCLFLAHYCFGLGARLRRTETLVVTGLVGLAT
LLVATNPWHGLFYLPGTRLGVLDGRPSAIFEHGPLFHALASLLYIFLSLAAAIAAAAAFR
APRAMRPAWMMMLFGTLVPLAANLAYVTLETTLFGFDPTPFAFAFVLLVFTWAIYANRSL
DLTSQARDLIFFNLTDPVLVLDAGGRIVGMNPAAQALMPDFAPGQSPSDTGPLARLRPLL
EEKEGEGRWQRVEIGDRILEIRLMRMRKPLGGRQTLLGAVVLLTDVTDLHRNAMRLELAL
GLARNQLAEITRLREISERLARSDPLTGLGNRRALDLVFEAAQPEHSSIGLALLDIDHFK
QINDRFGHSAGDRVLRRFAEAVTEVLPEGTHAFRVGGEEFLILCPGFDMAAMAGLVGQVA
HQVQQKPPLRVQDHSPLTFSAGIAVRPEDGSSLDQLYARADACLYEAKRSGRNRFIPSPE
RPALDGAGPLREGSRDPAGEDVLLARHLSDRQSRMAVLMRELMRATGPEVDGAIDRALAV
MGAQCGADRAYVFRIEEGMYLSNTHEWCRDGIRPERPSLQRLPISLIEPWLPFLQEDATI
DIPDVSALEERNPAKEHLVSQGIQALALAPLMDGPALAGFVGFDAVGRRAPFDPGETAIL
RSLADAVGAALARHGAETIAASAQGIARAAERDLARLAHVAEVMTNLVIILDTELRILWV
NRAFETQTGYRLADVAGRDFASLVRGPQTDPAAVAAVQAAVERRESHEGETINHDARGHP
YWIHFNIHPMFDRDGTYLGYVSVETVISDRKALERELEARNALIAGVLRTSVSAILATDT
AGRVVYANAAAQHLLALTPAPDDPQVFRVPDWPLETLDGQPVGEAALPPALVRRSGEDQH
DLRYAVRLPEGGRRFLSINAAPLPPAPHGAEIVMSVTDITDAEAVADRLRQLADEDPLTG
LANRRALSAALEARLAAAAGPAPLALIMLDIDNFKSVNDTMRHEAGDRVLCIVAERLRAC
AGREDLLARLGGDEFMLLASGLDREAAVVLAERLRDAIARPIRIDTQPIRLTASAGVALC
PDQGTVMPLLMTGADIALHAAKRAGRNRTILLSRELFAAEERRSAITRALDGPALDRLRL
VYQPQFSLVGNGGLAGVEALLRWTDPVLGDVCPDEFIPLAEEVGLIVTIDDRVIAQAARQ
LRHWAACGWYPRLSINVSAQSLSRREFAQDTLQLLAAERIDPRQITLELTETSLLAPSSA
EQNIASLRRSGIGLAIDDYGTGYASLSYLHRLRATEIKIDRSFIAGLTSENPRHSRTLIR
AIIGLAGTLGMSTTAEGVETDAQREWLRQAGCDRIQGHLLSLPLARDELEARFLEAPHLE
DAHAPLPHPHRHLLDDPAPSGSVPEGEPDGHVERTLR
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctttcctgctttacctccctcagcctcgacagcgccgtctatgcgaccgtg
gcaaccctggccggtttcgtgctgctcgtctcctggaccctgcgtcaggaccattttttc
ggccgcagacattttctggcctgccttttcggcatgatctggtggctcggcgccgcatcc
ctcgagcttgcgaccccgacgcttgcctgcaagcttgccttcgcatcggcagcctggccc
gcaatcaccctcgtgccgatctgctggtgcctctttctcgcccactactgcttcggactt
ggcgcgcgcctgcggcgcaccgaaaccctcgtcgtcacgggacttgtcggtctcgcgacg
ctcctggtcgcgaccaatccctggcacgggctgttctacctgccgggcacgcggctcggg
gtgctcgacgggcggccctccgccatcttcgagcacgggccgctgtttcatgccctggcc
tcgctgctctacatcttcctctccttggccgcagccattgcggccgcggccgccttccgg
gctccgcgcgcgatgcggccggcctggatgatgatgctcttcggcacccttgtgccgctg
gccgccaacctggcctatgtgacgctcgaaaccaccctcttcggcttcgatccgacgccc
ttcgcctttgccttcgtccttctggtcttcacctgggccatctatgccaaccggtccctc
gatctgacgtcccaggcacgcgacctgatcttcttcaacctcaccgatccggtgctggtg
ctggatgccggggggcggatcgtcgggatgaacccggcggcgcaggcgctgatgccggac
ttcgcgcccggccagagcccgtcggacaccggcccgctcgcgcgccttcgccccctgctc
gaggagaaggaaggggaaggaagatggcagcgggtggagatcggggatcgtatcctcgag
atccggctgatgcgcatgcgcaagccgctgggtggtcggcagacccttctcggcgccgtg
gttctgctgaccgacgtgaccgatctccatcgcaatgcgatgcgtctcgagctggcgctg
gggctggcgcgcaaccagcttgccgaaatcacgcgcctgcgggagatctccgaacgtctc
gcacgctccgatccgcttacgggtctcggcaaccgccgcgcccttgatctcgtcttcgaa
gccgcccagccggagcattcttcgatcggtctcgccctgctcgacatcgatcatttcaag
cagatcaacgaccgcttcggccattccgcgggagaccgggtgctgcgtcgctttgcggag
gcggtcaccgaggtgctgccggaagggacacacgccttccgggtgggcggcgaggaattc
ctgatcctctgcccgggcttcgatatggccgcaatggccgggctcgtcggacaggtggcg
caccaggtgcaacagaagccgcccctgcgcgtgcaggatcattctcccctgaccttctcc
gccgggattgccgtccgacccgaggacggcagcagtcttgaccagctctatgcccgggcc
gacgcctgcctctatgaggccaagcggagcggacgcaaccgcttcattccttctcccgaa
cgcccggccctggatggggcggggcccctccgggagggatcccgcgatcctgccggagaa
gatgtcctcctcgcgcggcacctgtcggaccggcagtcgcggatggctgtcctgatgcgc
gagctgatgcgggccacgggccccgaggtggatggcgccatcgaccgggcgcttgcggtc
atgggggcgcaatgcggggcggaccgggcctatgtgttccggatcgaggagggcatgtat
ctcagcaacacgcatgaatggtgccgcgacggcatcaggcccgaacgaccctcgctgcag
cggctgccgatctcgctcatcgagccctggctgccgttcctgcaggaggacgccacgatc
gacattcccgacgtctcggccctggaggagaggaacccggccaaggaacatctcgtctcc
cagggcatccaggccctggccttggctcctctcatggacggcccggcccttgccggtttc
gtgggcttcgatgcggtcggacggcgcgcgcccttcgatccgggggagacggccatcctg
cgctcgctcgcggatgcggtcggggcggccctggcccggcacggcgccgaaacgatcgcc
gcgagcgcccaaggcatcgcccgggcggccgaacgcgatctcgcccggctcgcccatgtc
gccgaggtgatgacgaacctcgtcatcatcctcgataccgaactgcggatcctctgggtc
aatcgggccttcgaaacccagaccggctaccggttggccgatgtggcagggcgggacttc
gcgtccctggtccggggtccgcagaccgatcccgcagccgtggccgcggtgcaggccgcc
gtcgagcggcgcgagagccacgagggcgagaccatcaatcatgatgcccgcggacaccct
tactggatccacttcaacatccatccgatgttcgatcgggatggcacctatctcggctat
gtgtcggtcgagacggtgatcagcgaccgcaaggcgctcgagcgcgaactcgaggctcgc
aatgccctcatcgccggtgtcctgcgcacgagcgtgtcggccattctcgcgacggatacc
gccgggcgggtggtctatgccaatgccgcggcccagcatctcctggcacttacgcccgcc
cccgacgatccccaggtcttccgcgtgcccgactggccgctcgagacgctcgacggccag
ccggtcggcgaggctgccctgccccccgccctggtgcgcagatccggcgaggaccagcat
gacctgcgctatgcggtccgtctgccggagggcggccggcgcttcctctccatcaatgca
gcccccctgcccccggctccgcacggagccgaaatcgtgatgtcggtgaccgacatcacc
gatgccgaagccgtcgccgatcggctgcgccagcttgcggacgaggatccactgaccggc
cttgccaatcgccgcgcgctgagcgcagcccttgaggctcggctggcggctgccgccggc
cctgcccccctggccctgatcatgctcgacatcgacaatttcaagtccgtgaacgacacg
atgcgccatgaagccggcgaccgtgtgttgtgcatcgtcgccgaacgtctgcgcgcctgc
gccggccgggaggatctcctcgcccggttggggggggacgagttcatgctgctggcctcc
ggactggaccgggaggcggcggtggtgctcgccgaacggttgcgggacgccattgcccgg
ccgatccggatcgacacgcagccgatcaggctcaccgcctcggcgggagttgccttgtgc
cccgaccagggaacggtgatgcccctgctgatgaccggggccgacatcgccctccacgcc
gccaagcgggccggacggaaccggaccatcctgctctcccgggagctgtttgcggccgaa
gaacgacgcagcgccatcacccgggcgctggacggccccgccctcgacaggctgcgactg
gtctatcagccgcagttctccctcgtgggcaacggcgggctggcaggcgtcgaggcgctc
ctgcgctggacggacccggttcttggagacgtgtgccccgacgagttcattccgctggcc
gaggaagtcggcctgatcgtgaccatcgacgaccgggtcatcgcgcaggcggcccgccag
ctccggcactgggcggcttgcggctggtatccccggctgagcatcaatgtctcggcacag
agcctgtcccgacgggaattcgcgcaggataccctgcagctcctggcggcggaacggatc
gacccccgccagatcaccctcgaactgacggaaacctcgctccttgcgccttcctctgcc
gagcagaacatcgcctccctgcgccgcagcggcatcggccttgccattgacgactatggg
accggatatgcctccctttcctatctccaccggctgagagccacggaaatcaagatcgac
cgcagcttcatcgcgggcctcacgtccgaaaatccccggcacagcaggacactcatccgt
gccatcatcgggcttgccggaacgctggggatgagcacgacggccgaaggggtggagacc
gacgcacaacgggagtggctccggcaggcggggtgcgaccgcattcagggccatctcctg
agtcttcccctggcgcgggacgaactcgaggcccggtttctcgaagccccgcatctcgag
gacgctcacgcaccgctcccacatccccatcggcacctgctcgatgatcccgccccttcg
ggcagcgttcccgaaggagagccggatgggcatgtcgaaagaactcttcgatag
DBGET
integrated database retrieval system
