KEGG   Rhinolophus sinicus (Chinese rufous horseshoe bat): 109447068Help
Entry
109447068         CDS       T04863                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
rss  Rhinolophus sinicus (Chinese rufous horseshoe bat)
Pathway
rss03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    109447068 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rss03400]
    109447068 (LIG4)
Enzymes [BR:rss01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109447068 (LIG4)
DNA repair and recombination proteins [BR:rss03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     109447068 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 109447068
NCBI-ProteinID: XP_019586620
LinkDB All DBs
Position
Unknown
AA seq 911 aa AA seqDB search
MAASQNSQTVASHVPFADLCSTLERIQRSKGRADKIRHFREFLDSWRRFHSALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSAKRKDSVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGVSHQIIFSVFHNDATELHNVTTDLEKVCRQLHDPSVGLTDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDVYEYFSRNGYKYTE
QFGAFPQEGSLTPFIHKAFKTDIQICILDGEMMAYNPNTQTFMQKGNKFDVKRMVEDSDL
QTCYCVFDVLMINNKKLGRETLRTRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDNREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPPSSEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKASEIVSSEMYRTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDDGPQEKKRKAAPKIKKVIGIIEHLKAPNLSNINKVSNTFE
DVEFCVMNGIDSHPKLDLENKIAELGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNADEQTPEEMTPVIADLEHRYCWDNSPLSMFRHHTIYLDLYTVINDLSTKIEGTRLAI
TALELRFHGAKVVSGLAEGVSHVIIGEDHSRVGDFKAFRRTLKRKFKILQEGWVTDSIDK
CVLQEECQYLL
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaaattcgcaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagacaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacagtgccctccataagaatcaaaaagatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgccaagctttatattgaattgctcaatttacct
cgagaaggaaaagatgctcttaaacttttaaattatagaacacctactggaactcgtgga
gatgctggagactttgcaatgattgcatactttgtattgaaaccaagatgtttgcagaaa
ggaagtttaaccatacagcaagtaaatgacattttagactcgattgccagcaataattct
gccaaaagaaaggactcagtaaagaagagtcttcttcagcttataactcagagttcagca
cttgaacaaaagtggcttatacgcatgattgtaaaggacttaaagcttggtgttagtcac
caaataatattttcagtttttcataatgatgctactgagttgcataatgtcaccacagac
ctggaaaaagtctgcaggcaactgcatgatccttcagtaggactcactgatatttctatc
actttattctctccctttaaaccaatgcttgctgcaatagcagatattgaacgaattgag
aaggacatgaaaaatcagagtttctacatcgaaaccaagctagatggcgagcgtatgcaa
atgcacaaagatggggacgtgtatgaatacttctcccgaaacggatataaatatacagaa
cagtttggtgcctttccacaagaaggttctcttacaccattcattcataaggcattcaaa
acagatatacaaatctgtatccttgatggtgagatgatggcctataatcctaatacacaa
acttttatgcagaaggggaacaagtttgatgttaaaagaatggtagaagattctgatctg
caaacttgttattgtgtttttgatgtgttgatgatcaataataaaaaactaggacgtgag
accctgagaacaaggtatgaaattcttagtagtatttttacaccaataccaggtagaata
gaaatagtgcaaaaaacgcaagctcatacgaagaacgaagtaattgatgctctgaatgaa
gcaatagataacagagaagagggaatcatggttaaacatcctctgtccatttataagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatggactgatggat
gaattggacatcataattgtcgggggctattggggtaaaggttctcggggtggaatgatg
tctcattttttgtgtgctgtagcagagaaacccccttctagtgaaaaaccttcagtgttt
catactctctgtcgtgttggctcgggttacaccatgaaagaactgtatgatctgggttta
aaactggccaaacattggaagccttttcataaaaaagctccaccaagtagcattttatgt
ggaacagaaaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaaa
gcatcagagattgtctccagtgaaatgtatagaactggctgcactttgcgttttccacga
attgaaaagataagagaagacaaagagtggcatgaatgcatgactctcgatgatttagaa
caacttcgagggaaagcatctggaaagcttgcctctaagcacctttatgtaggtggtgat
gatggaccacaagaaaagaagcggaaagctgccccaaagattaagaaagttattggaatt
attgagcacttaaaagcacctaacctttctaacataaacaaagtttccaatacatttgaa
gatgtggagttttgtgttatgaatggaatagacagccatccaaagcttgatctggagaac
aaaattgcagaacttggtggttatatagtacaaaatcccggcccagacacgtactgtgtt
attgcagggtctgagaacatcagagtgaaaaacataatttcatcaaataaacatgatgtt
gttaagcctgagtggctgttagagtgttttaagaccaaaagctgtgtgccatggcagcct
cgctttatgattcacatgtgcccatcaacaaaacagcattttgctcgtgaatatgattgt
tatggcgatagttattttgttgatacagatttgaaccaactgaaggaagtgttttcagga
attaaaaatgctgatgaacagactcctgaagaaatgactcctgtgattgctgatttagaa
catcgctattgctgggacaactctcctctcagtatgtttcgacaccacaccatttatttg
gacttgtatactgttattaatgacttgagtaccaaaattgagggaacacgattagctatc
acagccttagagcttcgatttcatggagcaaaagtggtttctggtttagctgagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttggagattttaaagcttttcgaaga
actcttaagaggaagtttaaaattctgcaagaaggttgggtaactgattcaatagacaaa
tgtgtattacaggaggaatgtcaatatttgctttaa

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