Rickettsia slovaca 13-B: Rsl_395
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Entry
Rsl_395 CDS
T01671
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv00470
D-Amino acid metabolism
rsv00550
Peptidoglycan biosynthesis
rsv01100
Metabolic pathways
rsv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rsl_395 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rsl_395 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rsl_395 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsv01011
]
Rsl_395 (ddlB)
Enzymes [BR:
rsv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rsl_395 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rsv01011
]
Precursor biosynthesis
Amino acid ligase
Rsl_395 (ddlB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
RimK
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AEV91984
LinkDB
All DBs
Position
339766..340731
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AA seq
321 aa
AA seq
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MHKYQTHWVEHSIVKILSSTGKKHIALMAGGMSAEREVSLVSSEGVSKALIELGYRVTFI
DMGADIAVRLQEIKPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGVLSSALAFDKIHS
RIWFLTNNINMAESIVVNKSDNIKNDPMKRPYVIKPLTQGSSIGVEVIFAEDDFNFADYD
FPYGDQVIIEQYIKGRELQVVVLNGKALGALEIKLLKNRFYDYETKYTEGFADHLCPAPL
PANLYEKLLIESEKIYKTMNCKGPARAEFILEEQTNKLYALEINTHPGMMPLSIVPEIAA
YAGINFTNLIEEIIKTASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcataaatatcaaacacattgggtagaacactctatagtcaaaatattaagtagtacc
ggtaaaaagcatatagcattaatggcaggtggtatgtctgctgagcgtgaagtatcgtta
gtgtcaagcgaaggagttagtaaagctttaattgaattaggatatagagttacctttatt
gatatgggagcggatattgcagttagattacaagaaataaaacctgatatcgtttttaat
tgcctgcacggtacatatggtgaagacggttgtttaccaggattacttaatataatgcgg
attccttatactcatagcggcgtgttatcttcagctttagcattcgataaaatacattct
aggatctggtttttaacgaataatattaatatggcagaaagcattgttgtaaataaaagc
gataatataaaaaatgatcctatgaaacgaccgtacgttattaagcctcttacgcaaggt
tcaagtattggtgttgaggtgatatttgcagaagacgattttaactttgccgattatgat
tttccttacggtgatcaggtaataatagaacaatatataaaagggcgagaattgcaagta
gtggtattaaacggcaaagctcttggagctttagagattaaattactaaagaatcgtttc
tatgattatgaaactaaatataccgaaggatttgctgatcatctttgtcctgctccgcta
cctgctaatttatatgagaaattacttatagaatcagaaaaaatttataaaacaatgaat
tgtaaaggtcctgctagagcagagtttattttagaagagcagacaaacaagttatatgct
ttggagataaatactcacccaggtatgatgcctttatcaatagtgccggaaattgcagct
tatgcagggataaattttactaacttaattgaagaaattataaagacggcaagctttgaa
tcatga
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