Raphanus sativus (radish): 108808411
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Entry
108808411 CDS
T06014
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108808411
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108808411
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108808411
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
108808411
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108808411
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108808411
Prokaryotic type
108808411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
DAGK_cat
Chordopox_A20R
Motif
Other DBs
NCBI-GeneID:
108808411
NCBI-ProteinID:
XP_018436067
UniProt:
A0A6J0JKA2
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Position
6:complement(32148027..32150992)
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AA seq
418 aa
AA seq
DB search
MADNHPKDEASLSAIIQNASSVKQNEIFFCDPLLSPGSCFLLPHGTLVYNKLIEFIKKEY
WKRGYEEVISPNIYNMKLWETSEHAASYKENMFTFDIDKQEFGLKSINGPGHCLMFKHRV
RSYKELPIRLADFGVLHRNEASAALSSLTHTRRFQQDDAHIFCTKEQVVKEIKDVLDFVD
YVYTKFGFTYELQLSTRPEENTKDLQRWEEAEKDLTEALQEFGKPFIVNRGEGTLCGPKI
DITLSDAIKRTFQCATLQLDFQLPALFELEYTTKVEGNLETPVMIHRTVLGSIERMLSIL
LDHYQRKWPFWLSPRQVIVCSSSNNENHRSYAEQVRNQIHEAGYNVDVDTTDRNISEKVG
EAEIAQYNYILVVGDEEVATRQVTALLRDSSYSGRSKFPVMNIDALLDEFKLRIVKFL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatcatcccaaggatgaggcttctctctcagccatcatccagaatgcttca
tctgtgaaacaaaatgaaattttcttttgtgacccactcttgagccctgggagttgcttt
ctcctcccacacggcactcttgtatataacaagttgattgaattcattaagaaagaatat
tggaaaaggggttacgaagaggttatttcaccgaatatttacaacatgaaactctgggaa
acatcagaacatgctgcaagctataaggaaaatatgttcacatttgatattgataaacaa
gaattcgggctcaaatctatcaatggccctggtcactgcttgatgttcaaacacagagtt
cggtcctataaagaattacccattagactggctgactttggagtgttacatcgaaatgag
gcaagtgcagctcttagtagtctgacccatacccgacggttccagcaggatgatgcacac
atattctgtacaaaggaacaggttgtaaaggaaatcaaagatgtattggattttgtggac
tatgtttacacaaaatttggctttacctatgagctacagctctcaacgaggccagaggaa
aacactaaagatttgcaaagatgggaggaagctgaaaaagatcttacagaagcactacaa
gaatttggaaagccattcatagtgaacagaggtgagggtacattatgtggcccaaagata
gatataacattgtctgatgcaataaaaaggacgttccaatgtgctactttacagcttgat
tttcaacttccggcactcttcgaactggaatatactacaaaggttgaagggaatttggag
acacctgttatgatacatagaacggtgttgggatctattgagcgtatgctttccatattg
ttagaccactaccaaagaaaatggcctttctggcttagtccgaggcaggtcatagtttgc
tcttcgtcaaacaatgagaatcatcgttcctacgcagaacaggtgaggaaccaaattcat
gaagctggctacaatgttgacgttgacacaacagacagaaacatctcggagaaggtggga
gaagctgagatcgcgcagtacaactacatactagttgtgggtgatgaagaagttgcaacc
agacaggtgactgctctgctacgagactcaagctattcaggccgttcaaaattcccagtg
atgaatattgacgctcttctcgatgagttcaagctcaggattgtcaaatttctttaa
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