Raphanus sativus (radish): 108810147
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Entry
108810147 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108810147
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108810147
Enzymes [BR:
rsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108810147
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108810147
Prokaryotic type
108810147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
108810147
NCBI-ProteinID:
XP_018437784
UniProt:
A0A6J0JSQ8
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All DBs
Position
1:2504695..2507694
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AA seq
373 aa
AA seq
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MSDPNLKHPLEDSRAYQERLSKVARIDAFSDEEESEEADSGLVISGTELIVNPRMQRYLI
AVEYIGTRFYGSQQQPKYRTVVGVLQEAFHKFTGQPVKIFCSSRTDAGVHALSNVCHVDV
ERISKRKPGELLPPHEPGVVQKAVNHFLQKNEGDVMVIDVRCVPSNYHARYKAKERTYFY
RLLSGSDPLSILEKDRAWHVPEELNLRAMQEACRVLVGSHDFSSFRAAGCQAKSPVRSLD
ELSVTEVPSTPYFPSLTERTWSNLNNGDPLTCSSQPKTETAGVTTNVGEFVGSTNGDTFG
VRRRHRCYVVTARSRGFLYHQVRLIVAVLKCVGTGELTVTDVERILKAKNVSASKPMAPA
SGLYLARVKYELP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctaatctgaagcatcctcttgaggattctagggcttatcaagagaggctc
tcaaaggtggcgagaatcgatgcattcagtgacgaagaagaatcagaggaagcagactca
ggattggtcatctctgggacggagctgatagtaaaccctagaatgcagcgttacttgatt
gccgttgaatatataggaacgcgtttctatgggtcacaacagcagcctaagtatcgcaca
gtcgtcggcgtattgcaggaggcttttcataagtttactgggcagccagttaagatcttc
tgctcaagtcgaacggatgcaggagttcatgcactatcaaatgtttgtcatgtagatgtg
gaacgcatcagtaaaagaaagcctggtgaattgttaccacctcatgagcctggtgtcgtc
cagaaagctgtgaaccatttcttacagaaaaacgaaggtgatgttatggtgattgatgtt
cggtgtgtcccaagtaattaccatgccagatataaagccaaggagcgcacatacttctac
cgcttgctatcggggtcggatcctttatccatccttgaaaaagaccgtgcctggcatgtg
cctgaggagctaaatcttcgcgctatgcaggaagcatgcagagttcttgttggatctcat
gattttagctccttcagggcagctggttgccaggcaaagtcaccggtgagatctttagat
gaactcagtgtcactgaagtaccatcaactccatattttccatctctcacggaaaggact
tggagtaacttaaacaatggagatcctctcacatgttccagtcaacccaagactgagact
gctggtgttactacaaatgtgggtgagtttgtggggtctacaaatggcgacacttttggt
gtaagaagacgacaccgctgctatgtcgtaacagcgcgttcccgcggttttctttaccac
caggttcgactgattgtagcagtactgaaatgtgtaggcactggagaactgaccgtcaca
gacgttgaaagaatcctgaaggcgaagaatgtgtctgcatccaaacccatggctcctgca
tctggtctgtatcttgcgcgtgtcaaatatgaactcccataa
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