Raphanus sativus (radish): 108825686
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Entry
108825686 CDS
T06014
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108825686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108825686
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108825686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
MUS81-like_WH
EME1-MUS81_C
DUF1495
DUF6429
HTH_45
DUF6308
Motif
Other DBs
NCBI-GeneID:
108825686
NCBI-ProteinID:
XP_018454521
UniProt:
A0A6J0L4K9
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Position
9:20998191..21001743
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AA seq
626 aa
AA seq
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MDEERRVVCRENQGLADYVLQKKREYADKPKGLSENLERTFLKAYRSVCDSKDPITTLKD
LSHLKGFGKWMLKMTKGYFDNGAECSEQDDLPQNCAGDKAKGKKRYTPQRNSVAYALLIT
LHRETSNGKEFMRKAELIDATEASGLSHAPVGPEKGKGKAGLGNSKREWYSGWNCMTTLI
HKGLVVKSSNPAKYMLTDEGREVANECITRSGLPTLDILSDDETDPATQNSISEQTAIPS
DILEKFTPFGYSKEQVVAAFREVSDGSQDKDPSTLWLSVMCHLRQAEVYNPCVDSRNRRK
DAAGPSRAQTCQVDLEGSHAKKFRSSDDGYTSKPSGPSHSPLQSFSSSLPSDGVTCLPPL
TFGDSFEEAYQVILILDDREQFATKGSRSRKIVDYICSEFKIKIEVRRLPVGDCIWIARH
KRLGAEYVLDFIVERKNIDDLRSSIRDNRYRDQKLRLQRSGLKKLIYVVEGDPNQSDAAE
SIKTACFTTEILEGFDVLRTSGLGETLRKYGQLTTSIHQYYKSLANDDDRNKAAYPCYDS
FVKRCQDLDKMTISDVFAIQLMQVPQVTEEIAVAVLDMYPTLLSLASAYSQLEGNVSAQE
EMLRNRSNNVITATASKNIFKLVWAE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagagaagggtagtgtgtcgggagaaccaaggattagcggattatgtgttg
cagaagaagcgagagtacgctgataagcccaagggtttgtccgaaaacctggagaggaca
tttcttaaggcgtatagaagtgtctgcgactccaaggatcccattaccactctgaaagac
ttatctcacttaaagggatttggcaagtggatgcttaagatgacgaaaggctattttgat
aatggagctgaatgttctgaacaagatgatttacctcaaaattgtgctggggacaaggct
aaggggaaaaagcggtacactccgcaaagaaactctgtggcttatgcattactaataaca
ttgcacagagagacttcgaatgggaaagagttcatgcgcaaagcagagcttattgatgct
actgaagcaagtgggctctcacacgcccctgttgggccagagaaaggaaaagggaaagca
ggacttggaaactctaagagggagtggtatagtggatggaactgcatgacaacacttata
cacaagggtttagtggtcaaatctagcaaccctgcaaagtacatgctgacagatgaaggt
cgtgaagtagcaaatgaatgcatcacacgatctggattacctacacttgacatcttgtcc
gatgatgaaacggatcctgctactcaaaattccatctcagaacaaacagccattcctagt
gatattcttgaaaagtttacaccgtttgggtattctaaggaacaagtcgttgctgcattc
agagaggtttcagatggatctcaggacaaagatccgtcaactctctggttatctgtgatg
tgccatcttcgtcaggcagaagtttataacccatgtgtggactctcggaatagaaggaaa
gatgcagcaggaccttctagagcgcagacttgtcaagttgatctggagggatctcatgct
aagaagttccgctctagcgatgatggatacacctcaaaaccatctggtccaagtcattct
ccattgcagtccttctcatcttctttgccttcagatggagttacatgccttcctcctctt
acatttggagattcgtttgaggaagcttatcaagtgatattgattctggatgaccgagaa
cagtttgccactaagggatcacgatccaggaagatagttgattacatatgctctgaattc
aagatcaagattgaggttagaagattaccagtaggggattgtatctggattgctaggcac
aagcgtcttggggctgagtatgttctggacttcattgttgagaggaagaacattgatgat
ttacgctcgtcaattagagacaatcgctatagggaccaaaaacttagacttcagagatcg
ggattaaagaagctgatatacgtcgttgaaggggatccaaaccagtctgatgcagcagaa
agcattaaaacagcttgtttcacaacggagattctggagggatttgatgtgttgaggaca
agcgggcttggtgagacgctgagaaaatacggtcaactcactacatcaatacaccagtac
tacaagtcgttggcgaatgatgatgaccggaacaaagctgcgtatccttgttatgatagt
tttgtgaaaaggtgtcaagatcttgataaaatgacaatcagcgatgtatttgccattcag
cttatgcaggtcccgcaggtaactgaggaaatcgctgtagctgttcttgacatgtaccca
acacttttatctcttgcttctgcctattctcagctagaagggaatgtctcagcgcaagaa
gaaatgttgagaaacaggagcaacaatgtcattactgcaacagctagtaagaacatattc
aagctagtttgggcggagtga
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