Raphanus sativus (radish): 108826069
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Entry
108826069 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 5
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108826069
00071 Fatty acid degradation
108826069
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108826069
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108826069
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108826069
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108826069
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
108826069
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108826069
Exosomal proteins of breast cancer cells
108826069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108826069
NCBI-ProteinID:
XP_018454948
UniProt:
A0A6J0L500
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Position
9:19597228..19602212
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AA seq
666 aa
AA seq
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MTSQKRFIFEVEAAKEATDGKPSIGPVYRSTFAKDGFPNPIDGIDSCWDIFRTAVEKYPN
NRMLGRREIVNNKAGKYEWKTYKEVYDIVIKIGNSIRSCGIEEGGKCGIYGANSPEWIIS
MEACNAHGLYCVPFYDTLGSGAVEFIISHAEVSIAFVEEKKIPELLKTCPNSTKYMKTVV
SFGGVKSEQKEEADKLGLVIHAWDDFLKLGEGKQYDLPVKKKSDICTIMYTSGTTGDPKG
VLMSNESIVTITAGVRHFLAIFNESLTEKDVYMSYLPLAHVFDRAVEECIIQVGGSIGFW
RGDVKLLIEDLGELKPSIFCAVPRVLERVYTGLQQKLSVGGFFRKKVFNVAFSYKFGNMK
KGQSHVEAAPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESFLRVVACCHVLQGYGL
TESCAGTFVTFPDDLDMLGTVGPPVPNVDIRLESVPDMEYDALGSTPRGEICIRGKTLFS
GYHKREDLTKEVLIDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLAQGEYVAVENLENVYG
QVEAIDSIWVYGNSFESFLIAVANPSQQTLERWALENEVDGDFDSICQNAKAKAFILGEL
VKTAKERKLKGFEIIRAVHLEPVAFDIERDLLTPTYKKKRPQLLKYYQNVIDDMYKTAKE
GQASGQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacagaagagattcatcttcgaggtggaagcagctaaagaagccaccgatgga
aaaccctccattggtcctgtctatcgcagtactttcgccaaagacggtttccctaaccct
atcgacgggatcgacagctgttgggatatcttccgcacggctgttgagaaatatccaaac
aatcgcatgcttggtcgacgtgagattgtgaacaacaaggcaggaaagtacgagtggaag
acatacaaagaagtatatgacattgtcataaaaattggaaactctatccgtagctgcggg
attgaggagggaggaaaatgtggtatttacggtgcaaattctccggagtggatcataagc
atggaggcatgcaatgcacatgggctctattgtgttcctttttacgatactttaggctct
ggtgccgtggagtttattatttcccatgcagaagtttccattgcttttgtagaggagaaa
aagattcctgagcttcttaagacatgtccaaactccacaaagtatatgaagactgttgtg
agctttggcggtgtcaaatcggaacagaaagaagaagctgataagttaggactggtaata
catgcttgggatgacttcttgaagctgggtgaaggtaaacaatatgatcttcctgttaaa
aagaaaagcgacatttgcacaattatgtatactagcggaaccactggggacccaaaggga
gttctcatgtcaaatgagagcattgttaccataacagctggagtgaggcatttcttagcg
atttttaacgaatccctaactgagaaggatgtctacatgtcttatcttcctcttgcgcac
gtctttgaccgggctgtcgaggagtgcattattcaagttggtggttcaatcggtttctgg
cgtggggatgttaagttgttgattgaagaccttggtgagctaaagccaagtattttctgc
gctgttcctcgtgtcctagaacgagtatacacaggtctgcagcagaaactttctgttggt
ggtttcttcagaaagaaagttttcaatgttgctttctcctataaatttggaaatatgaag
aaggggcagtctcatgtcgaagccgctccattctgtgacaaacttgtcttcaacaaggtt
aaacaaggactgggaggcaatgtgaggattattctgtctggagcagctcctctagctagt
cacatagagtcatttcttagagttgtggcatgttgtcatgttctacaaggatatggtcta
actgaaagctgtgctggtacttttgtcaccttccctgatgatcttgacatgcttggaact
gttggtccaccagtgccaaacgtagatatacgcctagaatctgtccctgacatggaatac
gatgctcttggaagtactccgcgaggcgaaatctgcatccgtgggaaaactctgttttct
ggataccacaaacgtgaagacctcacaaaagaggttcttattgatggatggtttcacaca
ggtgatgttggtgagtggcaaccagatggaagcatgaagataattgaccggaagaagaac
atcttcaaactcgcgcaaggggagtacgttgcagttgagaatttagaaaatgtctatggt
caagtagaagccattgattcaatatgggtgtatgggaacagctttgagtccttccttatc
gcagtggctaacccaagtcagcaaactcttgaacgctgggccctggagaatgaagtggat
ggagatttcgactctatatgtcaaaacgcaaaagcaaaagcattcatacttggagaactc
gttaagacagcaaaagagagaaagttgaagggttttgagatcattagagctgttcatttg
gaacccgtggctttcgacatagaaagagaccttcttactcctacctacaagaagaagagg
cctcaattgctcaaatactatcagaatgtgattgatgatatgtacaagactgcaaaggaa
ggtcaagcttcaggacagtag
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