Raphanus sativus (radish): 108830827
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Entry
108830827 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108830827
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03060
Protein export
rsz04141
Protein processing in endoplasmic reticulum
rsz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108830827
04141 Protein processing in endoplasmic reticulum
108830827
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108830827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108830827
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rsz02044
]
108830827
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
108830827
Secretion system [BR:
rsz02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
108830827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
108830827
NCBI-ProteinID:
XP_018459901
UniProt:
A0A6J0MZJ2
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Position
4:38683116..38685792
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AA seq
475 aa
AA seq
DB search
MGGGFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGILIAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS
GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRKFSGNFFVNLLGQWKESEYSGQSIPVSGLAYLITAPASFSDMAAHPF
HALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPT
AAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagggtttagagtattgcatttggtgaggccgttcttggctttcttgcctgag
gtccagagtgctgacaggaaggtgcctttcagagagaaggttatctacactgtcatctct
ctcttcatcttcctcgtctgcagtcagcttcctctctatggtatccactccaccaccggt
gctgatcctttctactggatgcgtgtcattcttgcttccaaccgtgggactgtgatggag
cttggtattactcctatcgtcacctctgggctcgtgatgcagctcttggctggttctaag
attattgaggttgacaacaatgtccgtgaggaccgtgccctcttgaatggtgctcagaag
cttcttggtattctgattgccatcggcgaggctgttgcttacgttctttccggaatgtat
ggccccgttggacagcttggtgttggaaacgccattctaatcatcctccagctcttcttt
gctggaatcattgttatctgccttgacgagcttcttcagaaaggatacggtctcggctca
ggaatctcccttttcatcgccaccaacatctgtgagagcattatctggaaggcatttagc
ccaaccaccattaacactggccgtggagctgagtttgaaggcgctgtcatcgcgttgttc
catatgctgataactaagtccaacaaggttgcagctctccgccaagcgttctaccggcag
aaccttccgaatgtcaccaacttgctcgccactgtcttgatcttcctgattgtcatctac
ttccaaggcttccgtgtggttttgcctgtgagatcaaagaatgcccgtgggcaacagggt
tcttacccaatcaagctgttctacacctctaacatgcccatcattctccagtccgctctc
gtctcaaatctgtacttcatctctcagcttctctacaggaagttcagtggaaacttcttt
gtgaaccttttgggacaatggaaagagtctgagtacagtgggcaatctattccagttagt
ggtctggcttacctcatcactgctccagcaagcttctctgacatggcagctcatccgttc
catgctctgttctacattgttttcatgctcactgcttgtgctcttttctcaaagacatgg
attgaggtctccggatcttcagctagggacgtagctaagcagcttaaggaacaacaaatg
gtgatgcctggacacagagagtcaaacttacagaaggagctgaacaggtatatcccaaca
gcagcagctttcggaggagtgtgcatcggtgcattgaccgtgctggctgatttcatggga
gccattgggtcggggactgggattctcttggcggtcacaatcatatatcagtatttcgag
acgttcgagaaggagaaagcaagtgaactcggcttctttgggttctaa
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