Raphanus sativus (radish): 108833866
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Entry
108833866 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108833866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108833866
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108833866
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108833866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108833866
NCBI-ProteinID:
XP_056865470
UniProt:
A0A9W3DNQ6
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All DBs
Position
4:50808357..50810196
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AA seq
327 aa
AA seq
DB search
MDLDSMDCTSTIDLTDDEEIHQDRHSYASVSKHHSTNNNNANTASGLFPTTTSVHELLEC
PVCTNSMYPPIHQCQNGHTICSSCKNRVHNRCPTCRQELGDIRCLALEKVAESLELPCKY
MSLGCPEIFPYYSKLEHETVCDFRPYNCPYAGSECSVMGDIPFLVSHLRDDHKVDMHSGC
TFNHRYVKSNPREVENATWMLTVFHCFGEYFCLHFEAFQLGTAPVYMAFLRFMGDETEAR
SYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNIALFFSGGDRKELKLRV
TGRIWKEQQQGGVEARGGGGACIPNLS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatagcatggactgcacttcaaccattgatttaacagatgacgaagagatc
catcaagatcgccattcctacgcatcggtttcaaagcatcatagtactaataacaacaac
gcgaatactgcttctggtctttttccgacaaccactagtgttcatgagcttctcgaatgt
cctgtctgcaccaattccatgtaccctccgattcaccagtgtcaaaacggacatactata
tgttcatcttgtaaaaacagagttcacaatcgctgccctacatgtagacaagagctaggt
gatatccgttgtttagcactcgaaaaagtagccgagtctcttgagctaccttgcaagtac
atgtcacttggctgtccggagatattcccttattacagcaaactcgaacacgagaccgta
tgtgacttcaggccttataactgtccgtacgctggttcggagtgttctgtcatgggtgat
atccctttcttagtttctcatttgagggatgaccacaaggtggatatgcattctgggtgt
actttcaaccaccgttatgtcaagtctaatcctcgtgaagtcgaaaacgccacgtggatg
ttaactgtctttcactgctttggtgaatacttttgtcttcattttgaggcattccagctc
ggaacggctccagtttacatggcgttcctgcgtttcatgggggacgagacagaagctcgg
agctacaattacagtttggaagtgggaggttatggtcggaagctgatttgggaaggaaca
ccgagaagcgtgagagacagtcacaggaaagttagagacagtcatgatgggctaatcata
cagaggaacattgctctcttcttctcaggtggagacaggaaagagctgaaactgcgagtc
actggaagaatatggaaagaacagcagcaaggtggtgttgaagctcgtggaggaggagga
gcttgtatcccaaacttgtcctaa
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