KEGG T06014: 108842454

Raphanus sativus (radish): 108842454

Entry

108842454         CDS       T06014

Name

(RefSeq) glycine-rich RNA-binding protein 5, mitochondrial

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

rsz Raphanus sativus (radish)

Pathway

rsz03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:rsz00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108842454
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108842454
   03041 Spliceosome [BR:rsz03041]
    108842454
Messenger RNA biogenesis [BR:rsz03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108842454
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108842454
Spliceosome [BR:rsz03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    108842454

SSDB

Motif

Pfam:

RRM_1 RRM_7 RRM_occluded DUF1866

Other DBs

NCBI-GeneID:

108842454

NCBI-ProteinID:

XP_018470876

UniProt:

A0A6J0MH62

LinkDB

Position

2:complement(2715943..2718083)

AA seq 274 aa
MAFLSKVGRIFRQTSTHVSASNSIMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGE
VVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGR
GFGGPGGGYGAPGGGYGGGGGYGAPGGYGGGGGGYGAPAGGYGGGGAGGYDAPAGGYGGN
SPYGGNSGGDGYGVAGGVGGSDNFAQGSSSSAGFDDKFSSNEPLGNGTDHQLESAGDEQF
GGSDNQFGDSENGQTEAGADGFDQTDDGDVAKRA

NT seq 825 nt +upstreamnt +downstreamnt
atggctttcttaagtaaagttggaaggatatttaggcagactagcacccatgtctctgcc
tctaactcaataatgctacagagcatccgttgcatgtcttcttccaaaatctttgttgga
ggtatctcctacagcactgatgagtttggcttaagagaagctttcagcaaatatggagaa
gttgttgatgccaaaattatcgtggaccgtgaaactggtagatcgaggggttttgctttc
gtgacgtttacttcaaccgaggaggctagtaatgcaatgcagttggatggacaggacctt
catggtcgaagaattagggtgaactacgctactgaaagaggaagtgggtttggaggaaga
gggttcggtggtcctggtggtggttatggtgctccaggcggtggttatggaggcggtggt
ggttatggtgctccaggcggttatggaggaggcggtggtggttatggtgctccagctggt
ggttatggaggaggcggtgctggtggctatgatgctccagctggtggttatggaggtaac
tctccttatggtggcaattccggtggtgatggctatggtgtcgctggtggtgttggtgga
agtgacaactttgcccaaggcagttcttctagcgctggctttgatgacaagtttagcagc
aacgaaccactaggcaatggtacggaccatcagcttgaaagcgctggcgatgagcagttt
ggtggcagtgacaatcagtttggtgactcagagaacggtcaaacagaggctggtgcagac
gggtttgatcagactgatgatggtgatgttgccaagagagcttaa

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