Raphanus sativus (radish): 108847605
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Entry
108847605 CDS
T06014
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00900
Terpenoid backbone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108847605
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rsz01006
]
108847605
Enzymes [BR:
rsz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108847605
Prenyltransferases [BR:
rsz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108847605
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
108847605
NCBI-ProteinID:
XP_018476386
UniProt:
A0A6J0MXK6
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Position
3:17923801..17926912
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AA seq
428 aa
AA seq
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MLFRRGISRISSKFLRNRSFSQSLVASHRLSIIIPGQGGHHSCSDSTLKGYVCRGTTYSF
KSPFFGGAGFTHHHHLYHHTSSAVEEELDPFSLVADELSLLSNKLREMVVAEVPKLASAA
EYFFKRGVEGKQFRPTILLLMATALNVRVPEALAAESSDIISSELRVRQRGIAEITEMIH
VASLLHDDVLDDADTRRGVGSLNFVMGNKISVLAGDFLLSRACVALAALKNTEVVSLLAT
VVEHLVTGETMQMTSTTDQRHSMDYYMQKTYYKTASLISNSCKAVALLAGQSAEVAMLAF
EYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRKVVGQL
EKDPTNVDVALEYLGKSNGIQRTRELAMEHANLAAAAIGSLPETDDEDVKRSRRALIDLT
QRVITRNK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaggaggggtatttctcggatctcttccaagtttctgagaaaccgcagcttc
tctcaatctcttgtcgcttctcatcgcctctcaatcatcatccccggacagggtggtcat
cactcttgttccgactccacactcaagggttacgtttgcagaggaactacttattcgttc
aaatctccctttttcggtggtgctgggtttacacatcatcatcatctctatcaccacacc
agctcagcagttgaggaggagcttgacccgttttcgcttgtggccgatgagctctcactt
cttagtaataagttgagagaaatggttgttgccgaggttccgaagcttgcctctgcggct
gaatacttcttcaaaaggggcgtggaaggcaaacagtttcgtccaactattttgctgttg
atggcgactgctctgaatgtacgcgtaccagaagcattggctgctgaatcatcagatatt
atctcatcagagttacgcgtaaggcaacggggcattgctgagatcaccgaaatgatacat
gttgcaagcctcctgcacgatgatgtcttggatgacgctgatacaaggcgtggtgttggt
tccttaaactttgttatgggtaacaagatatcggtattagcaggagactttttactctct
cgggcttgtgtggctcttgctgctctaaagaacacagaggttgtatcgttgcttgcaact
gttgtagaacatcttgttaccggtgaaaccatgcaaatgactagcacaaccgatcagcgt
catagtatggactactacatgcagaagacatactataagacggcatcactaatctcaaac
agctgcaaagcagttgctttacttgctggacaatcagcagaagttgccatgttagctttt
gaatacgggaagaatctgggcttggcattccaattgatagacgacgttcttgacttcact
ggcacatctgcctctctaggaaagggatccttatcagacatccgccacgggatcataaca
gctccaatcctatttgccatggaggagtttccacaactacgcaaagttgttggtcaactt
gaaaaagatccaacgaatgttgacgttgctttagagtatcttgggaaaagtaatggaata
caaaggacaagagagttagctatggaacatgctaatctcgcagcagcagcgattgggtct
ctacctgaaacagacgatgaagatgtcaaaagatcgaggcgggcacttattgacttgaca
cagagagtcattaccagaaacaagtga
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