Raphanus sativus (radish): 108848103
Help
Entry
108848103 CDS
T06014
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108848103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108848103
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
108848103
Membrane trafficking [BR:
rsz04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
108848103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
108848103
NCBI-ProteinID:
XP_018477023
UniProt:
A0A6J0MYY7
LinkDB
All DBs
Position
3:complement(25750665..25756389)
Genome browser
AA seq
1020 aa
AA seq
DB search
MDLPSKFLCWVVLFLGIFSSIESRYMVYNTSHTMVPGKLNVHVVPHSHDDVGWLKTVDQY
YVGSNNSIQVACVQNVLDSIVPALLADKNRRFIYVEQAFFQRWWREQSEEIKNIVKGLIR
SGQLEHINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAY
LLGAEVGFDSVFFGRIDYQDREKRKGDKSLEVIWRGSKSLGSSSQIFAGAFPKNYEPPPG
GFYYEITDDSPVVQDDPDLFDYNVQERVNAFVSAALDQANITRTNHIMFTMGTDFRYQYA
HTWFRQMDKLLHYVNLDGRINALYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWT
GYFTSRPALKRYVRVMSGYYLAARQLEFFKGRSEKGPNTDSLADALAIAQHHDAVSGTSK
QHVADDYAKRLAIGYVEAESVVATSLAHLTKLDPTTIQQCLLLNISYCPASEINLSEGKS
LTVLAYNPLGWKRVDIVRLPVVDGDIAVHDSEGHEVESQLVPFTDEYAALRSYHVEAYLG
HAPTQVPKYWLVFSASVPPLGFTTYTISTAKKSGGYSSKSHVSRYQKGEQSTVDVGHEHL
KLSFSTGQGKAINYFNSRTSMTEPLKQTFSYYSSYNGTNDKEPQNSGAYVFRPNGTFPIK
PEGQVPLTVIRGPLVDEVHQQINPWISQVTRVYKGKEHVEVEFIVGNIPIKDGVGKEVVT
QISSSLKSDKTFYTDSSGRDYIKRIRDYRSDWKLEVNQPVAGNYYPINHGIYLQDSQKEF
SVMVDRAIGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQNKCTGLTIQGKYYYR
IDPSGEGAKWRRTFGQEIYSPLLLAFAQHDDGKPMSFGAASFSGIDSSYSLPDNVALLTL
QELDDGNVLLRLAHLYEVGEDKDLSGVASVELKKLFPGKKIEKVTEMSLSANQERSVMEK
KRLVWKVEGEGSNEEMKNVKRGREIDPRKLVMELYPMEIRTVLIRLERPPSHSHIYRFDA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggatcttccttccaagtttctgtgttgggttgttttgtttctgggaatcttctcaagc
attgaatcgaggtacatggtctacaatacttcacataccatggtccctggtaaacttaat
gtccatgtggttcctcattcccacgatgatgttggttggctcaaaaccgttgaccagtac
tatgtcggctctaacaactctatccaggttgcttgtgttcaaaatgtgctggattcaatt
gttcctgcgctgctggctgataagaatcgcagattcatttatgttgaacaggcgtttttt
cagcgatggtggagagaacaaagtgaggagatcaaaaacattgtgaaaggacttatacgc
tcaggacagctagagcatataaatggtggtatgtgtatgcacgatgaagcagcaccacac
tatatagacatgattgatcagacgactctggggcaccggttcattatcagagagttcaat
gtgactccaagaatcggttggcagattgatccgtttggacattctgcagtgcaggcttac
ttgctaggcgcagaagttggattcgactcggtcttctttggtcggatagattaccaagac
agggagaagcgtaaaggagacaagagtcttgaagttatctggcgaggctccaagagtctc
ggttcttcttcacagatttttgctggtgctttccctaagaactacgaacctccacctggt
ggcttctactatgaaatcaccgatgattcccctgttgtccaagatgatccagacctgttt
gattacaatgttcaagagcgagtcaatgcctttgtatctgcagctttagatcaggccaac
attactcgaacaaatcacatcatgttcaccatgggaacagatttcaggtaccagtatgca
cacacctggtttcgacaaatggacaagcttcttcattatgttaacctcgatgggcgtatc
aatgctctctactctactccttccatatacacagatgcaaaacacgcagcgaatgaggct
tggcccctaaaaacagaggactatttcccttatgcagaccgtataaacgcttactggact
ggatattttacaagtaggccagcacttaagcgttatgtcagagtgatgagtggctactac
ttggcggcaaggcagctggagtttttcaaagggagaagtgagaagggtccgaatactgat
tcgctagcagatgccctggcaattgcgcagcatcatgacgctgtttctggtacatcgaag
cagcatgtggctgatgattatgctaaaagactagcaataggctatgtggaggctgagagt
gtggttgccacctctcttgctcatttgactaaactagaccctactaccatccaacagtgt
ttgctgctgaacataagttactgccctgcaagcgaaatcaacttatcagaggggaaaagc
ttgaccgtattggcttataacccacttggatggaagcgagtggacattgtccgacttcct
gttgtggacggagacattgcggtgcatgactctgagggacacgaggttgagtctcaactc
gttccattcaccgatgaatatgcggccttaaggagctaccatgtggaggcatacttaggt
catgcccctacacaggtgcctaagtattggcttgtgttttcggcctctgtgcctcctctt
ggtttcaccacttacactatctccactgctaagaaatcaggtggatattctagcaaatca
catgtctccagataccaaaaaggcgaacagtcaactgttgacgttggtcatgagcatcta
aagcttagtttctccactggtcaagggaaagcaatcaattattttaacagcagaacctcg
atgacagaaccgctaaaacagacatttagctactactcttcgtacaatggaacaaatgac
aaagaacctcagaactcgggtgcgtatgtcttccgtccaaatggcacattccccatcaag
ccagaaggacaggttcctttgactgttatacgtggaccactggtagatgaagttcatcaa
cagataaatccgtggatctctcaggtcactagagtttacaagggcaaggagcatgtggaa
gttgaatttattgttggtaatataccgattaaagatggagttggcaaagaagtcgtaacc
cagatctcaagttccctgaaaagtgacaagactttctacacagattcaagtggccgtgat
tatatcaaaaggatccgtgattatcggtcagactggaagctagaagtcaaccaacctgtt
gcaggaaactattacccgataaaccatggaatatacctgcaagacagtcagaaggagttc
tcagtgatggtggacagagcgattggagggtccagcattgtggacggacaagttgagctt
atgcttcataggagactgctccttgatgactccagaggtgtagcggagaatctaaacgag
acagtgtgtgttcaaaacaagtgtactggactaactatccaaggaaaatattactataga
atcgatccatctggagaaggtgcaaaatggcgaagaactttcggacaagagatctactcg
ccactcctcttagcctttgctcaacatgatgatgggaagccaatgagttttggtgcagca
tcattctctgggattgattcatcctacagtttgccagacaatgtcgcacttctgaccctg
caggaacttgatgatgggaacgtgctcctgcgtctagctcatctttatgaggtgggagag
gataaagatctttcaggagtggcaagtgtggaactgaagaagcttttccccggaaaaaag
atagagaaagtgactgagatgagcctatcagcaaaccaagaaagaagcgtaatggagaag
aagaggttggtgtggaaagtagaaggcgaaggatctaatgaagaaatgaagaatgtgaag
agagggagagaaatagatccaagaaagctagtgatggagctttaccctatggagattagg
acagtattgatccgcttggagcgtccaccttcccactctcacatctacagattcgatgct
tga
DBGET
integrated database retrieval system
